RNA id: TU92599



Basic Information


Item Value
RNA id TU92599
length 366
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G69129
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42396081 ~ 42413217 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCTTGTTTCACCTCCAGTGTTCCTCTACAGCGACTGGCTCCTCCCACCAACCTGACAGCATCtgagcaggtgagtcCAACAGCTTTTCCAGGTGAGCAGGTGTTTCTATCTGAGCCTGAGCTTCTACAGTCCAGGAGAGCAGACTCATGGCCTCCACACTGGAACTCTTTGGTCCTCATTGGAGGCTCCACTTCTCCATAGAGCGCCCCCTGGAGGACTGAAGGAGCCCCACAGCCAAGCTCCCTACAGACCACCTCTGCATCCTGCTGGTCAAAGTCatcttcacacactgaggaccagCGCTGGGTAGACTGGTTAGTGTTCACCTCCAGTCTGCCTGAGCACAGACTGGTCCCATCCACCAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92572 lncRNA downstream 172943 42209938 ~ 42223138 (-) True G69110
TU92563 lncRNA downstream 281322 42113244 ~ 42114759 (-) True G69104
TU92562 lncRNA downstream 282189 42112792 ~ 42113892 (-) False G69104
TU92297 lncRNA downstream 305552 42090073 ~ 42090529 (-) True G68919
TU92303 lncRNA downstream 306161 42044916 ~ 42089920 (-) True G68925
TU92602 lncRNA upstream 12535 42425752 ~ 42495934 (-) True G69131
TU92622 lncRNA upstream 84348 42497565 ~ 42536958 (-) False G69140
TU92626 lncRNA upstream 84348 42497565 ~ 42536958 (-) False G69140
TU92616 lncRNA upstream 99404 42512621 ~ 42536958 (-) False G69140
TU92633 lncRNA upstream 102623 42515840 ~ 42516752 (-) True G69144
XM_039802434.1 mRNA downstream 124870 42262425 ~ 42271211 (-) True LOC120560191
XM_039802496.1 mRNA downstream 139197 42241736 ~ 42256884 (-) True hpdb
XM_039802485.1 mRNA downstream 183379 42209201 ~ 42212702 (-) True LOC120560212
XM_039802495.1 mRNA downstream 216783 42175476 ~ 42179298 (-) True LOC120560222
XM_039804062.1 mRNA downstream 259742 42111748 ~ 42136339 (-) True LOC120561110
XM_039802513.1 mRNA upstream 245139 42658356 ~ 42662019 (-) True LOC120560234
XM_039802515.1 mRNA upstream 245139 42658356 ~ 42661523 (-) False LOC120560234
XM_039804064.1 mRNA upstream 250146 42663363 ~ 42809589 (-) True LOC120561114
XM_039802518.1 mRNA upstream 406657 42819874 ~ 42822645 (-) True LOC120560237
XM_039804065.1 mRNA upstream 409188 42822405 ~ 42854342 (-) True LOC120561115
TU92567 other downstream 263500 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 279820 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 281922 42112792 ~ 42114159 (-) False G69104
XR_005639437.1 other downstream 288959 42100375 ~ 42107122 (-) False rnf34a
XR_005639438.1 other downstream 288960 42098786 ~ 42107121 (-) False rnf34a
TU92624 other upstream 122050 42535267 ~ 42536075 (-) False G69140
TU92678 other upstream 359774 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 556867 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 556867 42970084 ~ 43014065 (-) False G69229
TU92743 other upstream 589038 43002255 ~ 43003347 (-) False chek2

Expression Profile