RNA id: TU92607



Basic Information


Item Value
RNA id TU92607
length 410
lncRNA type inter_gene
GC content 0.51
exon number 3
gene id G69136
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42518171 ~ 42519895 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGGAGCAGCTGTGTAGTTCTGCTGCGGACCTCCTCCAGTCTGCTGTGGACCGTCTGTCTGAAGCTGGTCTGGCAGCGCTGGGTGTCTTTGATATGTTGATCCAGACAGTCCTGCAGGGTGGAGCTTACAGCCTccagtctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatatatacacacacacacacagacacacacacacatatatacacacacacacacagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacagagacacacacacacacacacacacacacacacgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92633 lncRNA downstream 1419 42515840 ~ 42516752 (-) True G69144
TU92602 lncRNA downstream 22237 42425752 ~ 42495934 (-) True G69131
TU92596 lncRNA downstream 74326 42366029 ~ 42443845 (-) True G69127
TU92599 lncRNA downstream 104954 42396081 ~ 42413217 (-) True G69129
TU92572 lncRNA downstream 295033 42209938 ~ 42223138 (-) True G69110
TU92618 lncRNA upstream 15372 42535267 ~ 42536075 (-) True G69140
TU92619 lncRNA upstream 15372 42535267 ~ 42536075 (-) False G69140
TU92625 lncRNA upstream 15372 42535267 ~ 42536075 (-) False G69140
TU92637 lncRNA upstream 18147 42538042 ~ 42538316 (-) True G69148
TU92638 lncRNA upstream 18884 42538779 ~ 42539184 (-) True G69149
XM_039802434.1 mRNA downstream 246960 42262425 ~ 42271211 (-) True LOC120560191
XM_039802496.1 mRNA downstream 261287 42241736 ~ 42256884 (-) True hpdb
XM_039802485.1 mRNA downstream 305469 42209201 ~ 42212702 (-) True LOC120560212
XM_039802495.1 mRNA downstream 338873 42175476 ~ 42179298 (-) True LOC120560222
XM_039804062.1 mRNA downstream 381832 42111748 ~ 42136339 (-) True LOC120561110
XM_039802513.1 mRNA upstream 138461 42658356 ~ 42662019 (-) True LOC120560234
XM_039802515.1 mRNA upstream 138461 42658356 ~ 42661523 (-) False LOC120560234
XM_039804064.1 mRNA upstream 143468 42663363 ~ 42809589 (-) True LOC120561114
XM_039802518.1 mRNA upstream 299979 42819874 ~ 42822645 (-) True LOC120560237
XM_039804065.1 mRNA upstream 302510 42822405 ~ 42854342 (-) True LOC120561115
TU92567 other downstream 385590 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 401910 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 404012 42112792 ~ 42114159 (-) False G69104
XR_005639437.1 other downstream 411049 42100375 ~ 42107122 (-) False rnf34a
XR_005639438.1 other downstream 411050 42098786 ~ 42107121 (-) False rnf34a
TU92624 other upstream 15372 42535267 ~ 42536075 (-) False G69140
TU92678 other upstream 253096 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 450189 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 450189 42970084 ~ 43014065 (-) False G69229
TU92743 other upstream 482360 43002255 ~ 43003347 (-) False chek2

Expression Profile