RNA id: TU92616



Basic Information


Item Value
RNA id TU92616
length 272
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G69140
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42497565 ~ 42536958 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


catgtttctggaaacatctgaagagagaaatagaccgtgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92602 lncRNA downstream 16687 42425752 ~ 42495934 (-) True G69131
TU92596 lncRNA downstream 68776 42366029 ~ 42443845 (-) True G69127
TU92599 lncRNA downstream 99404 42396081 ~ 42413217 (-) True G69129
TU92572 lncRNA downstream 289483 42209938 ~ 42223138 (-) True G69110
TU92563 lncRNA downstream 397862 42113244 ~ 42114759 (-) True G69104
TU92637 lncRNA upstream 1084 42538042 ~ 42538316 (-) True G69148
TU92638 lncRNA upstream 1821 42538779 ~ 42539184 (-) True G69149
TU92659 lncRNA upstream 78263 42615221 ~ 42633725 (-) True G69169
TU92671 lncRNA upstream 111802 42648760 ~ 42649027 (-) True G69177
TU92673 lncRNA upstream 113333 42650291 ~ 42651406 (-) True G69179
XM_039802434.1 mRNA downstream 241410 42262425 ~ 42271211 (-) True LOC120560191
XM_039802496.1 mRNA downstream 255737 42241736 ~ 42256884 (-) True hpdb
XM_039802485.1 mRNA downstream 299919 42209201 ~ 42212702 (-) True LOC120560212
XM_039802495.1 mRNA downstream 333323 42175476 ~ 42179298 (-) True LOC120560222
XM_039804062.1 mRNA downstream 376282 42111748 ~ 42136339 (-) True LOC120561110
XM_039802513.1 mRNA upstream 121398 42658356 ~ 42662019 (-) True LOC120560234
XM_039802515.1 mRNA upstream 121398 42658356 ~ 42661523 (-) False LOC120560234
XM_039804064.1 mRNA upstream 126405 42663363 ~ 42809589 (-) True LOC120561114
XM_039802518.1 mRNA upstream 282916 42819874 ~ 42822645 (-) True LOC120560237
XM_039804065.1 mRNA upstream 285447 42822405 ~ 42854342 (-) True LOC120561115
TU92567 other downstream 380040 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 396360 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 398462 42112792 ~ 42114159 (-) False G69104
XR_005639437.1 other downstream 405499 42100375 ~ 42107122 (-) False rnf34a
XR_005639438.1 other downstream 405500 42098786 ~ 42107121 (-) False rnf34a
TU92678 other upstream 236033 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 433126 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 433126 42970084 ~ 43014065 (-) False G69229
TU92743 other upstream 465297 43002255 ~ 43003347 (-) False chek2
TU92737 other upstream 467628 43004586 ~ 43018251 (-) False chek2

Expression Profile