RNA id: TU92618



Basic Information


Item Value
RNA id TU92618
length 773
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G69140
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42497565 ~ 42536958 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgtgtgtgtgtgtgtcagagtgtgtatctgttgtctccagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagagtgtgtATCTGCtgtctccagtgtgtgtgtgtgtgtgtcagagtgtgtatctgttgtctccagtgtgtgtgtgtatcagagtGTGTATCTGCtgtctccagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtatctgctgtctccagtgtgtgtgtgtgtgtgtgtcagagtgtgtatctgttgtctccagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagagtgtgtATCTGCtgtctccagtgtgtgtgtgtgtgtgtatcagagtgtgtatctgttgtctccagtgtgtgtgtgtatatcagaGTGTGTATCTGCtgtctccagtgtgtgtgtgtgtgtgtatcagagtGTGTATCTGGtgtctccagtgtgtgtgtgtatcagagtgtgtatctgttgtctccagtgtgtgtgtgtatcagagtgtgtatctgttgtctccagtgtgtgtgtgtatcagagtgtgtatctgttgtctccagtgtgtgtgtgtatcagagtgtgtatctgttgtctccagtgtgtgtgtgtatcagagtgtgtatctgttgtctccagtgtgtgtgtgtatcagagtGTGTATCTGCtgtctccagtgtgtgtgtgtatcagagtGTGTATCTGCTGTCTCCAGTGTGTGTTCCAGCTCTGCAGCTCTGTCAGTCGTGTCCGTCTGTCCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92607 lncRNA downstream 15372 42518171 ~ 42519895 (-) True G69136
TU92633 lncRNA downstream 18515 42515840 ~ 42516752 (-) True G69144
TU92602 lncRNA downstream 39333 42425752 ~ 42495934 (-) True G69131
TU92596 lncRNA downstream 91422 42366029 ~ 42443845 (-) True G69127
TU92599 lncRNA downstream 122050 42396081 ~ 42413217 (-) True G69129
TU92637 lncRNA upstream 1967 42538042 ~ 42538316 (-) True G69148
TU92638 lncRNA upstream 2704 42538779 ~ 42539184 (-) True G69149
TU92659 lncRNA upstream 79146 42615221 ~ 42633725 (-) True G69169
TU92671 lncRNA upstream 112685 42648760 ~ 42649027 (-) True G69177
TU92673 lncRNA upstream 114216 42650291 ~ 42651406 (-) True G69179
XM_039802434.1 mRNA downstream 264056 42262425 ~ 42271211 (-) True LOC120560191
XM_039802496.1 mRNA downstream 278383 42241736 ~ 42256884 (-) True hpdb
XM_039802485.1 mRNA downstream 322565 42209201 ~ 42212702 (-) True LOC120560212
XM_039802495.1 mRNA downstream 355969 42175476 ~ 42179298 (-) True LOC120560222
XM_039804062.1 mRNA downstream 398928 42111748 ~ 42136339 (-) True LOC120561110
XM_039802513.1 mRNA upstream 122281 42658356 ~ 42662019 (-) True LOC120560234
XM_039802515.1 mRNA upstream 122281 42658356 ~ 42661523 (-) False LOC120560234
XM_039804064.1 mRNA upstream 127288 42663363 ~ 42809589 (-) True LOC120561114
XM_039802518.1 mRNA upstream 283799 42819874 ~ 42822645 (-) True LOC120560237
XM_039804065.1 mRNA upstream 286330 42822405 ~ 42854342 (-) True LOC120561115
TU92567 other downstream 402686 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 419006 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 421108 42112792 ~ 42114159 (-) False G69104
XR_005639437.1 other downstream 428145 42100375 ~ 42107122 (-) False rnf34a
XR_005639438.1 other downstream 428146 42098786 ~ 42107121 (-) False rnf34a
TU92678 other upstream 236916 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 434009 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 434009 42970084 ~ 43014065 (-) False G69229
TU92743 other upstream 466180 43002255 ~ 43003347 (-) False chek2
TU92737 other upstream 468511 43004586 ~ 43018251 (-) False chek2

Expression Profile