RNA id: TU92637



Basic Information


Item Value
RNA id TU92637
length 275
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G69148
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42538042 ~ 42538316 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CATGTTTCAttactctgttgatttgtgtttgtcgctgtgtgctcgtggtggaaaaTGAACGTAAACAAAGTTGCGTGCAGGTCGCctcaaggccaggctgatgttagaggtccctctagtggacagaacgtgtaacaacaaccacatgcttgtaGTGGCATTGAcgatgcataagcctgagtagtgtagaacgtatttaacaggctgcattttgagcattaaatattcgaatattattcgaatatttaaaaaaatctcaaatgGAAATCGAATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92622 lncRNA downstream 1084 42497565 ~ 42536958 (-) False G69140
TU92626 lncRNA downstream 1084 42497565 ~ 42536958 (-) False G69140
TU92616 lncRNA downstream 1084 42512621 ~ 42536958 (-) False G69140
TU92618 lncRNA downstream 1967 42535267 ~ 42536075 (-) True G69140
TU92619 lncRNA downstream 1967 42535267 ~ 42536075 (-) False G69140
TU92638 lncRNA upstream 463 42538779 ~ 42539184 (-) True G69149
TU92659 lncRNA upstream 76905 42615221 ~ 42633725 (-) True G69169
TU92671 lncRNA upstream 110444 42648760 ~ 42649027 (-) True G69177
TU92673 lncRNA upstream 111975 42650291 ~ 42651406 (-) True G69179
TU92668 lncRNA upstream 115319 42653635 ~ 42655922 (-) True G69175
XM_039802434.1 mRNA downstream 266831 42262425 ~ 42271211 (-) True LOC120560191
XM_039802496.1 mRNA downstream 281158 42241736 ~ 42256884 (-) True hpdb
XM_039802485.1 mRNA downstream 325340 42209201 ~ 42212702 (-) True LOC120560212
XM_039802495.1 mRNA downstream 358744 42175476 ~ 42179298 (-) True LOC120560222
XM_039804062.1 mRNA downstream 401703 42111748 ~ 42136339 (-) True LOC120561110
XM_039802513.1 mRNA upstream 120040 42658356 ~ 42662019 (-) True LOC120560234
XM_039802515.1 mRNA upstream 120040 42658356 ~ 42661523 (-) False LOC120560234
XM_039804064.1 mRNA upstream 125047 42663363 ~ 42809589 (-) True LOC120561114
XM_039802518.1 mRNA upstream 281558 42819874 ~ 42822645 (-) True LOC120560237
XM_039804065.1 mRNA upstream 284089 42822405 ~ 42854342 (-) True LOC120561115
TU92624 other downstream 1967 42535267 ~ 42536075 (-) False G69140
TU92567 other downstream 405461 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 421781 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 423883 42112792 ~ 42114159 (-) False G69104
XR_005639437.1 other downstream 430920 42100375 ~ 42107122 (-) False rnf34a
TU92678 other upstream 234675 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 431768 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 431768 42970084 ~ 43014065 (-) False G69229
TU92743 other upstream 463939 43002255 ~ 43003347 (-) False chek2
TU92737 other upstream 466270 43004586 ~ 43018251 (-) False chek2

Expression Profile