RNA id: TU92638



Basic Information


Item Value
RNA id TU92638
length 406
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G69149
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42538779 ~ 42539184 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gacgttacgtagcgagtaacgttagtacaacatcacagagctaacgttacgtagcgagtaacgttagtacaacatcacagagctgacgttacgtagcgagtaacgttagtacaacatcacagagctgacgttacgtagcgagtaacgttagtacaacatcacagagctgacgttacgtagcgagtaacgttagtacaacatcacagagctgacgttacgtagcgagtaacgttagtacaacatcacagagctgacgttacgtagcgagtaacgttagtacaacatcacagagctgacgttacgtagcgagtaacgttagtacaacatcacagagctgacgttacgtagcgagtaacgttagtacaacatcacagagctaacgttacgtagcgagtaacgttagtac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92637 lncRNA downstream 463 42538042 ~ 42538316 (-) True G69148
TU92622 lncRNA downstream 1821 42497565 ~ 42536958 (-) False G69140
TU92626 lncRNA downstream 1821 42497565 ~ 42536958 (-) False G69140
TU92616 lncRNA downstream 1821 42512621 ~ 42536958 (-) False G69140
TU92618 lncRNA downstream 2704 42535267 ~ 42536075 (-) True G69140
TU92659 lncRNA upstream 76037 42615221 ~ 42633725 (-) True G69169
TU92671 lncRNA upstream 109576 42648760 ~ 42649027 (-) True G69177
TU92673 lncRNA upstream 111107 42650291 ~ 42651406 (-) True G69179
TU92668 lncRNA upstream 114451 42653635 ~ 42655922 (-) True G69175
TU92694 lncRNA upstream 156989 42696173 ~ 42703992 (-) True G69189
XM_039802434.1 mRNA downstream 267568 42262425 ~ 42271211 (-) True LOC120560191
XM_039802496.1 mRNA downstream 281895 42241736 ~ 42256884 (-) True hpdb
XM_039802485.1 mRNA downstream 326077 42209201 ~ 42212702 (-) True LOC120560212
XM_039802495.1 mRNA downstream 359481 42175476 ~ 42179298 (-) True LOC120560222
XM_039804062.1 mRNA downstream 402440 42111748 ~ 42136339 (-) True LOC120561110
XM_039802513.1 mRNA upstream 119172 42658356 ~ 42662019 (-) True LOC120560234
XM_039802515.1 mRNA upstream 119172 42658356 ~ 42661523 (-) False LOC120560234
XM_039804064.1 mRNA upstream 124179 42663363 ~ 42809589 (-) True LOC120561114
XM_039802518.1 mRNA upstream 280690 42819874 ~ 42822645 (-) True LOC120560237
XM_039804065.1 mRNA upstream 283221 42822405 ~ 42854342 (-) True LOC120561115
TU92624 other downstream 2704 42535267 ~ 42536075 (-) False G69140
TU92567 other downstream 406198 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 422518 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 424620 42112792 ~ 42114159 (-) False G69104
XR_005639437.1 other downstream 431657 42100375 ~ 42107122 (-) False rnf34a
TU92678 other upstream 233807 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 430900 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 430900 42970084 ~ 43014065 (-) False G69229
TU92743 other upstream 463071 43002255 ~ 43003347 (-) False chek2
TU92737 other upstream 465402 43004586 ~ 43018251 (-) False chek2

Expression Profile