RNA id: TU92659



Basic Information


Item Value
RNA id TU92659
length 450
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G69169
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42615221 ~ 42633725 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgagttctcaatTGGACCAACAAGCCACTATTTTGGCTGAAAATTTTCCACGTTTTGCAAAAATAAGGATTCTCACCTGTGTGGCCTCTCAGGTGTCTCTGCAATAGTGAATTATACTTTAAGTCTTTCCCACGTGTCACAAATGAAAGACTTTTTACCTGTTTGAGTATTACGGTGAATCTCTGACACGTTAGTGTTGTCTACGTTGTTGCTGTGACTTCTGCTCTTGCGTCGTCTCTTCTTTGGTTCTGGCTCTGCATTTCTAGTTGATCCTGAGTCTCTATGCTTGCCTCCTTTCTGATCTTGGCTCTCAGCTTCATGCGAGTTGTGAGAGAGGAGCTGGTGATCACCGTTTGCTTCTGATTCCACAGAGGTTATAACTGGCATGTTGAGCTGCTGGTCAGAGagaacctcctcctccttacaGACATGTTGCTGTGGGAGCTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92638 lncRNA downstream 76037 42538779 ~ 42539184 (-) True G69149
TU92637 lncRNA downstream 76905 42538042 ~ 42538316 (-) True G69148
TU92618 lncRNA downstream 79146 42535267 ~ 42536075 (-) True G69140
TU92619 lncRNA downstream 79146 42535267 ~ 42536075 (-) False G69140
TU92625 lncRNA downstream 79146 42535267 ~ 42536075 (-) False G69140
TU92671 lncRNA upstream 15035 42648760 ~ 42649027 (-) True G69177
TU92673 lncRNA upstream 16566 42650291 ~ 42651406 (-) True G69179
TU92668 lncRNA upstream 19910 42653635 ~ 42655922 (-) True G69175
TU92694 lncRNA upstream 62448 42696173 ~ 42703992 (-) True G69189
XR_005639462.1 lncRNA upstream 134678 42768403 ~ 42769314 (-) False LOC120560255
XM_039802434.1 mRNA downstream 344010 42262425 ~ 42271211 (-) True LOC120560191
XM_039802496.1 mRNA downstream 358337 42241736 ~ 42256884 (-) True hpdb
XM_039802485.1 mRNA downstream 402519 42209201 ~ 42212702 (-) True LOC120560212
XM_039802495.1 mRNA downstream 435923 42175476 ~ 42179298 (-) True LOC120560222
XM_039804062.1 mRNA downstream 478882 42111748 ~ 42136339 (-) True LOC120561110
XM_039802513.1 mRNA upstream 24631 42658356 ~ 42662019 (-) True LOC120560234
XM_039802515.1 mRNA upstream 24631 42658356 ~ 42661523 (-) False LOC120560234
XM_039804064.1 mRNA upstream 29638 42663363 ~ 42809589 (-) True LOC120561114
XM_039802518.1 mRNA upstream 186149 42819874 ~ 42822645 (-) True LOC120560237
XM_039804065.1 mRNA upstream 188680 42822405 ~ 42854342 (-) True LOC120561115
TU92624 other downstream 79146 42535267 ~ 42536075 (-) False G69140
TU92567 other downstream 482640 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 498960 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 501062 42112792 ~ 42114159 (-) False G69104
XR_005639437.1 other downstream 508099 42100375 ~ 42107122 (-) False rnf34a
TU92678 other upstream 139266 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 336359 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 336359 42970084 ~ 43014065 (-) False G69229
TU92743 other upstream 368530 43002255 ~ 43003347 (-) False chek2
TU92737 other upstream 370861 43004586 ~ 43018251 (-) False chek2

Expression Profile