RNA id: TU92739



Basic Information


Item Value
RNA id TU92739
length 452
RNA type TUCP
GC content 0.59
exon number 5
gene id G69229
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42970084 ~ 43014065 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGAAGTCTTCACGTCCACGTCGGGATACGGGCTGGCCGTGGACGCGTGGAGCCTCGGAGTCCTGCTCTTCGTCTGtctgGGTGGTTATCCTCCGTTCCATGAAAACTTCAGCCGCCAGTCGATCACGGAGCAGATCATCCGCGGAGAGTTCACCATGGTGCCGTCCAAATGGAAACACATCTCTGACCCAGcgAAGGATGTGGTCAGGAAGCTGCTGGTAGTTGACCCCAGTAAGAGGATGACTATAGATGAAGCTCTGCAGCATCCCTGGCTCCAGGATGATGTCATGATGAAGACGGCTCACAGACTCATGTTCCCCTCCGacgctgatgctgctgctgccgccgctgccatgcaggAAGTGGAGTCAGCCTCCGGAGGGGAAACGAGGGGACGCggtgaaggagaagaagaagaggaaccTCCAGCCAAACGCAGCCAAGCCCCGCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92686 lncRNA downstream 150750 42780818 ~ 42819334 (-) True G69184
XR_005639461.1 lncRNA downstream 198651 42768404 ~ 42771433 (-) True LOC120560255
XR_005639462.1 lncRNA downstream 200770 42768403 ~ 42769314 (-) False LOC120560255
TU92694 lncRNA downstream 266092 42696173 ~ 42703992 (-) True G69189
TU92668 lncRNA downstream 314162 42653635 ~ 42655922 (-) True G69175
TU92780 lncRNA upstream 7067 43021132 ~ 43022838 (-) True G69254
TU92785 lncRNA upstream 23482 43037547 ~ 43038477 (-) True G69258
TU92793 lncRNA upstream 62190 43076255 ~ 43076982 (-) False card9
TU92796 lncRNA upstream 75576 43089641 ~ 43091900 (-) True G69266
TU92772 lncRNA upstream 89895 43103960 ~ 43104752 (-) True G69246
XM_039802439.1 mRNA downstream 11811 42873897 ~ 42958273 (-) False LOC120560194
XM_039802438.1 mRNA downstream 11811 42873897 ~ 42958273 (-) True LOC120560194
XM_039804065.1 mRNA downstream 115742 42822405 ~ 42854342 (-) True LOC120561115
XM_039802518.1 mRNA downstream 147439 42819874 ~ 42822645 (-) True LOC120560237
XM_039804064.1 mRNA downstream 160495 42663363 ~ 42809589 (-) True LOC120561114
XM_039804068.1 mRNA upstream 62165 43076230 ~ 43099165 (-) True card9
XM_039802523.1 mRNA upstream 91277 43105342 ~ 43141553 (-) True snapc4
XM_039802524.1 mRNA upstream 129323 43143388 ~ 43178989 (-) True pomt1
XM_039804069.1 mRNA upstream 209412 43223477 ~ 43251312 (-) True LOC120561119
XM_039804070.1 mRNA upstream 287554 43301619 ~ 43304446 (-) True LOC120561120
TU92678 other downstream 160462 42772991 ~ 42809622 (-) False LOC120561114
TU92624 other downstream 434009 42535267 ~ 42536075 (-) False G69140
TU92567 other downstream 837503 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 853823 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 855925 42112792 ~ 42114159 (-) False G69104
TU92794 other upstream 63787 43077852 ~ 43088827 (-) False card9
TU92756 other upstream 159100 43173165 ~ 43178971 (-) False pomt1
TU92775 other upstream 196954 43211019 ~ 43218894 (-) True G69249
TU92812 other upstream 236693 43250758 ~ 43251295 (-) False LOC120561119
TU92928 other upstream 357702 43371767 ~ 43380599 (-) True G69356

Expression Profile