RNA id: TU92772



Basic Information


Item Value
RNA id TU92772
length 389
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G69246
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43103960 ~ 43104752 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gctctggtgtttctccctctcattccccctgctctggtgtctccccactctcattccccctgctctggtgtttccccctctcattccccctgctctggcaccGACAGAGAGCAAAGAAAACCAGTCAAATAGATTGCGTAACAATTAGTAAATCACGTtgtttaaaggaagtttctgcaggaagaagaggagtaagagaaggaggagagtcAGCAGAATGTTTGGAGCTCTGTGGTGCGTTCAGTAACCTCAGAAAAAGTGAAAACCTGTCACTTTATTACATGTTTGTAATCTTTGATTGTGTCGTTTTGATTCAGCTTCTGTAAAGAAAATGTTCTGTAATTATGAGCAGATTATTTTGTAATAAAGAGAAAGTTTATGTGAAACTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92776 lncRNA downstream 7341 43006859 ~ 43096619 (-) True G69250
TU92796 lncRNA downstream 12060 43089641 ~ 43091900 (-) True G69266
TU92793 lncRNA downstream 26978 43076255 ~ 43076982 (-) False card9
TU92785 lncRNA downstream 65483 43037547 ~ 43038477 (-) True G69258
TU92780 lncRNA downstream 81122 43021132 ~ 43022838 (-) True G69254
TU92802 lncRNA upstream 47110 43151862 ~ 43152875 (-) False G69271
TU92804 lncRNA upstream 47110 43151862 ~ 43153110 (-) False G69271
TU92805 lncRNA upstream 47110 43151862 ~ 43152875 (-) False G69271
TU92806 lncRNA upstream 47110 43151862 ~ 43153110 (-) True G69271
TU92777 lncRNA upstream 61369 43166121 ~ 43194392 (-) True G69251
XM_039804068.1 mRNA downstream 4795 43076230 ~ 43099165 (-) True card9
XM_039802527.1 mRNA downstream 78910 43002497 ~ 43025050 (-) True chek2
XM_039802439.1 mRNA downstream 145687 42873897 ~ 42958273 (-) False LOC120560194
XM_039802438.1 mRNA downstream 145687 42873897 ~ 42958273 (-) True LOC120560194
XM_039804065.1 mRNA downstream 249618 42822405 ~ 42854342 (-) True LOC120561115
XM_039802523.1 mRNA upstream 590 43105342 ~ 43141553 (-) True snapc4
XM_039802524.1 mRNA upstream 38636 43143388 ~ 43178989 (-) True pomt1
XM_039804069.1 mRNA upstream 118725 43223477 ~ 43251312 (-) True LOC120561119
XM_039804070.1 mRNA upstream 196867 43301619 ~ 43304446 (-) True LOC120561120
XM_039804071.1 mRNA upstream 203596 43308348 ~ 43310847 (-) True LOC120561121
TU92794 other downstream 15133 43077852 ~ 43088827 (-) False card9
TU92737 other downstream 85709 43004586 ~ 43018251 (-) False chek2
TU92739 other downstream 89895 42970084 ~ 43014065 (-) False G69229
TU92756 other upstream 68413 43173165 ~ 43178971 (-) False pomt1
TU92775 other upstream 106267 43211019 ~ 43218894 (-) True G69249
TU92812 other upstream 146006 43250758 ~ 43251295 (-) False LOC120561119
TU92928 other upstream 267015 43371767 ~ 43380599 (-) True G69356
TU92966 other upstream 436491 43541243 ~ 43546558 (-) False phf19

Expression Profile