RNA id: TU92775



Basic Information


Item Value
RNA id TU92775
length 915
RNA type TUCP
GC content 0.58
exon number 5
gene id G69249
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43211019 ~ 43218894 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


aaaagtgtgagagagagtgagctgTAAAACATGAGAGCAGAGGATTAAAAACTGTTGATCGGCTGATCTCACACctccagctgtctgtctgccagtctgcctgtctgtctgtctgtaggtctgtctgtctgtctgtacaccTGCAGACATGTCCTCCCGGGGCGAGAGTAAGACAGCCTCTCAGTTTGTGTCTCTCACCATGAGGCTGAAGGATAAGCTCCACTCGCAGAAGGGCAGACGCTCTGAGCGAATCAAACACACCCCGTCCCAGCGAGTCAAGCCAGCAGACCTCAACCTGCAGCACAAGgtgtgtgtgttggaggacCAGCAGCGCGTGGTCATCAGCTCTCTGCAGTACTTCAAAGCTCTGGTGGATCGACTGGGAGTGGACAGACTGGGAGTGGACCAGTGTGCGGTGGGAGGTCTGCTGGGGGGGGCGTCTGGCGGGGTCCTGGAGGCGGTGCAGACTCTGGTCCAGCTGGAGCCACACCTGCACAACAGtaaGACCGTCTCCTCCTGTCTCACTCGTCTCTACCGGTCTTTGGCTCAGCTGATTCGCTGGGTCGATCAGGTGATGCTGCAAGGCGTCGCCCACGGCAACAAAGAGTTCACAGCAAGCGTTACCACGGTGATCAGGGCCGTGCTCGACAGCGTCAAGGAACTGGTTCGATTGGCTGCAGAGAGACAAGGCAGCTCCGCCCCCTTGTCTCCTGTCCAATCACAGGCTGCCGTGGGACAGACAGTTTCATCTGATGACCAGCAGACAGCAGACAGGAGTCCAGCAGATCCTGCAGAGGACTCAGCTCCTCCAAAACCCCCGATGACTTTCTCAGAGACCCTCCCCCAGACCTCCCTCCCCCAGACGACCCTCTCCCAGATGACCCTCCCCCAGACCTCCCTCTCCCAGGGACTCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92777 lncRNA downstream 16627 43166121 ~ 43194392 (-) True G69251
TU92804 lncRNA downstream 57909 43151862 ~ 43153110 (-) False G69271
TU92806 lncRNA downstream 57909 43151862 ~ 43153110 (-) True G69271
TU92802 lncRNA downstream 58144 43151862 ~ 43152875 (-) False G69271
TU92805 lncRNA downstream 58144 43151862 ~ 43152875 (-) False G69271
TU92810 lncRNA upstream 7041 43225935 ~ 43226903 (-) True G69273
TU92911 lncRNA upstream 47923 43266817 ~ 43450492 (-) True G69340
TU92913 lncRNA upstream 55585 43274479 ~ 43275772 (-) True G69342
TU92910 lncRNA upstream 167264 43386158 ~ 43396705 (-) False G69339
TU92909 lncRNA upstream 177426 43396320 ~ 43396705 (-) True G69339
XM_039802524.1 mRNA downstream 32030 43143388 ~ 43178989 (-) True pomt1
XM_039802523.1 mRNA downstream 69466 43105342 ~ 43141553 (-) True snapc4
XM_039804068.1 mRNA downstream 111854 43076230 ~ 43099165 (-) True card9
XM_039802527.1 mRNA downstream 185969 43002497 ~ 43025050 (-) True chek2
XM_039802439.1 mRNA downstream 252746 42873897 ~ 42958273 (-) False LOC120560194
XM_039804069.1 mRNA upstream 4583 43223477 ~ 43251312 (-) True LOC120561119
XM_039804070.1 mRNA upstream 82725 43301619 ~ 43304446 (-) True LOC120561120
XM_039804071.1 mRNA upstream 89454 43308348 ~ 43310847 (-) True LOC120561121
XM_039802458.1 mRNA upstream 262067 43480961 ~ 43528118 (-) True LOC120560199
XM_039802460.1 mRNA upstream 262067 43480961 ~ 43527562 (-) False LOC120560199
TU92756 other downstream 32048 43173165 ~ 43178971 (-) False pomt1
TU92794 other downstream 122192 43077852 ~ 43088827 (-) False card9
TU92737 other downstream 192768 43004586 ~ 43018251 (-) False chek2
TU92739 other downstream 196954 42970084 ~ 43014065 (-) False G69229
TU92812 other upstream 31864 43250758 ~ 43251295 (-) False LOC120561119
TU92928 other upstream 152873 43371767 ~ 43380599 (-) True G69356
TU92966 other upstream 322349 43541243 ~ 43546558 (-) False phf19
TU93018 other upstream 461582 43680476 ~ 43709236 (-) False LOC120560198

Expression Profile