RNA id: TU92812


Basic Information

Item Value
RNA id TU92812
length 538
RNA type TUCP
GC content 0.59
exon number 1
gene id LOC120561119
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43223477 ~ 43251312 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGCAGCGgcggaggagaggaagaggagagaagaagaactGAAGGTCATTTGAGAGAATCTGAGATTTCGGATCGATGATCGACTCACTGATCGCTGCGCGTGCACAGCGTAATGACATGACACAAGAGCACGGAGCGACAGACGGATTAGCTGCTGCATCCATCCACCTGCCTGTCTCCCTGcctgctgcctgtctgtctgactgaatCTCCACCAGCAGCATCCAGATTCCAcacctgtctttctctctctcgctctctctctctctctctgcctgtctcgctgtctctctatctctccgtctgtctctgtctgtctgtccacacctgtctctctccacacctGTCTCCCCGCCGTGTGCCGGCCGTGTCTCCGCCATGGGGAACCGGGGGATGGAGGACCTGATCCCGCTGGTGAACCAGCTCCAGGACGCCTTCGCGTCCATCGGCCAGAACTCGAGCCTCGACCTGCCGCAGATCGCGGTGGTGGGCGGCCAGAGCGCCGGCAAGAGCTCCGTTCTGGAGAACTTCGTGGGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92810 lncRNA downstream 23855 43225935 ~ 43226903 (-) True G69273
TU92808 lncRNA downstream 25034 43203661 ~ 43225724 (-) True G69272
TU92777 lncRNA downstream 56366 43166121 ~ 43194392 (-) True G69251
TU92804 lncRNA downstream 97648 43151862 ~ 43153110 (-) False G69271
TU92806 lncRNA downstream 97648 43151862 ~ 43153110 (-) True G69271
TU92911 lncRNA upstream 15522 43266817 ~ 43450492 (-) True G69340
TU92913 lncRNA upstream 23184 43274479 ~ 43275772 (-) True G69342
TU92910 lncRNA upstream 134863 43386158 ~ 43396705 (-) False G69339
TU92909 lncRNA upstream 145025 43396320 ~ 43396705 (-) True G69339
TU92912 lncRNA upstream 148766 43400061 ~ 43409122 (-) True G69341
XM_039802524.1 mRNA downstream 71769 43143388 ~ 43178989 (-) True pomt1
XM_039802523.1 mRNA downstream 109205 43105342 ~ 43141553 (-) True snapc4
XM_039804068.1 mRNA downstream 151593 43076230 ~ 43099165 (-) True card9
XM_039802527.1 mRNA downstream 225708 43002497 ~ 43025050 (-) True chek2
XM_039802438.1 mRNA downstream 292485 42873897 ~ 42958273 (-) True LOC120560194
XM_039804070.1 mRNA upstream 50324 43301619 ~ 43304446 (-) True LOC120561120
XM_039804071.1 mRNA upstream 57053 43308348 ~ 43310847 (-) True LOC120561121
XM_039802458.1 mRNA upstream 229666 43480961 ~ 43528118 (-) True LOC120560199
XM_039802460.1 mRNA upstream 229666 43480961 ~ 43527562 (-) False LOC120560199
XM_039802459.1 mRNA upstream 229666 43480961 ~ 43527562 (-) False LOC120560199
TU92775 other downstream 31864 43211019 ~ 43218894 (-) True G69249
TU92756 other downstream 71787 43173165 ~ 43178971 (-) False pomt1
TU92794 other downstream 161931 43077852 ~ 43088827 (-) False card9
TU92737 other downstream 232507 43004586 ~ 43018251 (-) False chek2
TU92741 other downstream 236693 42970084 ~ 43014065 (-) False G69229
TU92928 other upstream 120472 43371767 ~ 43380599 (-) True G69356
TU92966 other upstream 289948 43541243 ~ 43546558 (-) False phf19
TU93018 other upstream 429181 43680476 ~ 43709236 (-) False LOC120560198

Expression Profile