RNA id: TU92928



Basic Information


Item Value
RNA id TU92928
length 588
RNA type TUCP
GC content 0.60
exon number 4
gene id G69356
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43371767 ~ 43380599 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gggaagggTGGGACAGGTAGAGTTACCTCAGGTGTGTCCACTCAGTCTGCAGCCGCTGATCAACAGACACTGACGGTGACATCATGGCGTTCCATGCTGAGTTCGAGGGCGCGGGGCAGAGGGCGGGGCTTCAGGTGTGGCGGGTGGAGAACATGGATCTGGTTCCTGTTCCTGCCGCGCTGCACGGAGCTTTCTACAGCGGAGACGCTTACCTGGTCCTCCACAGCACGGAGAACCACCGGGGAGCCCTGCAGCACCACCTGCACTACTGGCTAGGGTCCGAGTGCTCTCTGGATGAGAGTGGTGCGGCGGCCATATTTGCGGTTCAGATGGACGACTTCCTGCAGGGGGCGCCGATCCAGTACCGTGAAGTCCAGGGCTACGAGTCCAAAACCTTCATAGAGTACTTCAAAACCGGACTCAAGTACATGaaagggggcgtggcctccGGCTTCCACCACGTGGTGACCAACCAGGTTCAGCGGCTGCTGCAGGTCAAAGGTCGACGCGTCATCAGGGCAACAGAGGTTCCTGTCAGCTGGCAGAGTTTCAACCAGGGAGACAGTTTCATCCTGGACCTGGGAGAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92913 lncRNA downstream 95995 43274479 ~ 43275772 (-) True G69342
TU92810 lncRNA downstream 144864 43225935 ~ 43226903 (-) True G69273
TU92808 lncRNA downstream 146043 43203661 ~ 43225724 (-) True G69272
TU92777 lncRNA downstream 177375 43166121 ~ 43194392 (-) True G69251
TU92806 lncRNA downstream 218657 43151862 ~ 43153110 (-) True G69271
TU92910 lncRNA upstream 5559 43386158 ~ 43396705 (-) False G69339
TU92909 lncRNA upstream 15721 43396320 ~ 43396705 (-) True G69339
TU92912 lncRNA upstream 19462 43400061 ~ 43409122 (-) True G69341
TU92962 lncRNA upstream 103511 43484110 ~ 43484519 (-) True G69371
TU92964 lncRNA upstream 129349 43509948 ~ 43511370 (-) True G69372
XM_039804071.1 mRNA downstream 60920 43308348 ~ 43310847 (-) True LOC120561121
XM_039804070.1 mRNA downstream 67321 43301619 ~ 43304446 (-) True LOC120561120
XM_039804069.1 mRNA downstream 120455 43223477 ~ 43251312 (-) True LOC120561119
XM_039802524.1 mRNA downstream 192778 43143388 ~ 43178989 (-) True pomt1
XM_039802523.1 mRNA downstream 230214 43105342 ~ 43141553 (-) True snapc4
XM_039802458.1 mRNA upstream 100362 43480961 ~ 43528118 (-) True LOC120560199
XM_039802460.1 mRNA upstream 100362 43480961 ~ 43527562 (-) False LOC120560199
XM_039802459.1 mRNA upstream 100362 43480961 ~ 43527562 (-) False LOC120560199
XM_039802461.1 mRNA upstream 100362 43480961 ~ 43512080 (-) False LOC120560199
XM_039802526.1 mRNA upstream 150634 43531233 ~ 43551988 (-) True phf19
TU92812 other downstream 120472 43250758 ~ 43251295 (-) False LOC120561119
TU92775 other downstream 152873 43211019 ~ 43218894 (-) True G69249
TU92756 other downstream 192796 43173165 ~ 43178971 (-) False pomt1
TU92794 other downstream 282940 43077852 ~ 43088827 (-) False card9
TU92737 other downstream 353516 43004586 ~ 43018251 (-) False chek2
TU92966 other upstream 160644 43541243 ~ 43546558 (-) False phf19
TU93018 other upstream 299877 43680476 ~ 43709236 (-) False LOC120560198

Expression Profile