RNA id: TCONS_00074612


Basic Information

Item Value
RNA id TCONS_00074612
length 533
lncRNA type antisense
GC content 0.46
exon number 2
gene id XLOC_038034
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 37817266 ~ 37820212 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTTCTGGAGGAGGTGGAGCCTGGGGACTGAGagcaagagagaaagagagcctGTGAGATAATAGGCTGTTCTGGGACCAGTGTGATGGCTCTTAAACTCCCAGCTGATGCCCGCACAGCAGGACTGCTCCACGATCAAAGCAAGGGCAAGCTCTTCCACTGAGAGGTCAGTTTAGCAGTGATTGATTGAAGTCAAGCTCCGTTGAACACATCCCAAAGAGTCAAGGGAGACAGCAGTGTAAAAGTACATTTTCAAGACTCCCAGCCCACACGCAGGTCACTCTGAAGAATCAGTCAGTGCATGTTTTTGAGAGCACGTTCCCATTGACTGAACCCCCTGTCAGTTGGGTGGCCCTCTTAGTGTGAAGTTTGGTAATGCGTGAAAAACATCTCCAGGTCGAATGTGTGTGGCCCATTCAAACCATTCTTTAGTCTTAGTCAAAGAAATTCACTTCTTTAAAAACAGTCTAGCATTTGTTTTATCTACAGTAGGTGACATTTAGTTATCactttaacataaaaaacaaaacccc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000153957

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00075426 lncRNA downstream 680010 37118184 ~ 37137256 (-) True XLOC_038031
TCONS_00075007 lncRNA downstream 796795 37015729 ~ 37020471 (-) True XLOC_038030
TCONS_00075425 lncRNA downstream 857605 36956993 ~ 36959661 (-) True XLOC_038029
TCONS_00075424 lncRNA downstream 876516 36937446 ~ 36940750 (-) False XLOC_038028
TCONS_00075423 lncRNA downstream 876787 36926826 ~ 36940479 (-) False XLOC_038028
TCONS_00075008 lncRNA upstream 249872 38070084 ~ 38071916 (-) True XLOC_038037
TCONS_00075427 lncRNA upstream 531369 38351581 ~ 38352885 (-) True XLOC_038040
TCONS_00075428 lncRNA upstream 738427 38558639 ~ 38559750 (-) False XLOC_038044
TCONS_00075429 lncRNA upstream 738427 38558639 ~ 38560263 (-) True XLOC_038044
TCONS_00075430 lncRNA upstream 888251 38708463 ~ 38709221 (-) True XLOC_038046
TCONS_00074608 mRNA downstream 67293 37481434 ~ 37749973 (-) False XLOC_038033
TCONS_00074607 mRNA downstream 68753 37481434 ~ 37748513 (-) False XLOC_038033
TCONS_00074606 mRNA downstream 68753 37481434 ~ 37748513 (-) False XLOC_038033
TCONS_00074609 mRNA downstream 180087 37493438 ~ 37637179 (-) False XLOC_038033
TCONS_00074605 mRNA downstream 203474 37481434 ~ 37613792 (-) False XLOC_038033
TCONS_00074613 mRNA upstream 52365 37872577 ~ 38021997 (-) False XLOC_038035
TCONS_00074614 mRNA upstream 52510 37872722 ~ 38021889 (-) True XLOC_038035
TCONS_00074615 mRNA upstream 209263 38029475 ~ 38042939 (-) False XLOC_038036
TCONS_00074616 mRNA upstream 210352 38030564 ~ 38036984 (-) False XLOC_038036
TCONS_00074617 mRNA upstream 212722 38032934 ~ 38042823 (-) True XLOC_038036
TCONS_00074610 other downstream 67347 37636957 ~ 37749919 (-) False XLOC_038033
TCONS_00074611 other downstream 67347 37747587 ~ 37749919 (-) True XLOC_038033
TCONS_00074599 other downstream 1034601 36782547 ~ 36782665 (-) True XLOC_038026
TCONS_00074598 other downstream 1046603 36770357 ~ 36770663 (-) True XLOC_038025
TCONS_00074597 other downstream 1051238 36765623 ~ 36766028 (-) True XLOC_038024
TCONS_00074619 other upstream 384195 38204407 ~ 38204528 (-) True XLOC_038039
TCONS_00074623 other upstream 649234 38469446 ~ 38469566 (-) True XLOC_038043
TCONS_00074627 other upstream 1410314 39230526 ~ 39255210 (-) False XLOC_038048
TCONS_00074636 other upstream 2261312 40081524 ~ 40350169 (-) True XLOC_038052
TCONS_00074637 other upstream 2564918 40385130 ~ 40385247 (-) True XLOC_038053

Expression Profile

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