Fish Transcriptome and Expression Database

RNA id: TCONS_00076249

Basic Information

Item	Value
RNA id	TCONS_00076249
length	1400
RNA type	mRNA
GC content	0.56
exon number	5
gene id	XLOC_038760
representative	False

Chromosome Information

Item	Value
chromosome id	NW_018394426.1
NCBI id	KZ116034.1
chromosome length	33615
location	20255 ~ 23752 (+)
genome version	GRCz11_2017_zebrafish_Genome
species	zebrafish (Danio rerio)

Sequence

ctgcagCAGAGCCAGAAGCCGTCCTCGGAGGAGATCACACTGATTGCGGATCAGCTCAGCATGGAGAAGGAGGTGGTGCGTGTGTGGCTCTGCAACCGCCGGCAGAAGGAGAAGCGGATCTATCCACCCAGCAGCAGCGCAGCGTCTCCTGCATCCGCCATCAAGACCATCTACAGCACACAGACTGCAGCGgtgtccAGCGGCTCGAACACACTGACGGTGAATCCTGTGGTTCCTCTGAGCTCCAGCGGCCTCTCGAACCTCACGCCTGCACCTGCTGTGACCTCGCAGACCCCGAGCTCCTCCGCCTCCGCTGGTAAACAGGAAATACGCGCTGCCACTTCCTCTGCTGCCACACTCACACAGGGGGCGGGGCCGTTGCTGGTGACGGGCGCAGGACTGGGTGGAGCCAATCTGACTACATTCGCTACGGGTTTGAACCCCACCATCATCACACCGTCACAGCTGGCACaaggggGGGCGCTGCTGAGCCTGGCTCCTGCTCTGGGAAACACACTGAGTCCTGCGCTGATGAACAATAACGCTCTGGCCACTATTCAGGctcTTGCGTCAGGCGGTGCTTTCCCCCTGACGTCTATTGATGGGAACACCAGCCTGCTCTTCGCCAACACCAGCGCAGCAAACTCCACCCCCAGCCTGGTGACCACGCCCTTTTTCCTTAATCCATCCGGCCTTTCTTTGCTGCCGGCCAATTTCCTGTCAGCAGGCGGGGCTGGAGGCGGAGCTCTCAACCTGCACCTGACCAGTGATGTGCAGCAGAATCTTGTTGCCACAACGACTAAGGGCGTGGCCCTGGCCTCGAAGGCTCAGTGAGCGTGTGCGGCTCCGCCCCCAATCCTGTTGCTGTTACCAAAAACACTGTGAGCGCAGGGCTGACGCCGCCGCCGCCGGGCTGGACTCTCAGACTAACACCTGAATTAACCAAATACCAGACTCTTTTCCAGCGCCGCTGATCTTTACCAGAGAATATTTGACCTAACAGAGTTTATATTGACTTTATACGagggtttgtgtttttattagcgGCTCTGAGACGAGCCGAGTGCAGATTTATAACCAAAAGCGTGTGATGTTCAGCTGGAGGGTCTGCAGGAGTGTGAGCTCCACGACACTTTATAAAGACGGTTAGAAGCTTTACCTTACTGAGGAACCATGCGGCAGGACACACCACTGTCCCCACAACGCTTCCTCATctacacctgtgtgtgtgtgtgtgtgtgtgtgtgctgttagtTTCTGTCAGGTTTTTACTCTCCTCACACTCAGCGTTAGTGTTCACTACTGTTTCTGAAGCCAaagactggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgctcctCTGTTCTCCTCAATCATCTGTTCTGACACACAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDART00000188333

JBrowse2

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

RNA id	RNA type	direction	distance	location	representative	gene id
TCONS_00076247	mRNA	upstream	11985	1250 ~ 8270 (+)	True	XLOC_038759
TCONS_00076251	mRNA	downstream	3444	26713 ~ 27407 (+)	True	XLOC_038761

gene	XLOC_000007 f7
RNA	TCONS_00000019
bioproject	PRJEB12982

model fish

Basic

Function

Jbrowse2

Neighbor

Expression

RNA id: TCONS_00076249

Basic Information

Chromosome Information

Sequence

Function

GO: NA

KEGG: NA

Ensembl:

JBrowse2

Neighbor

Expression Profile

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