Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU333104 |
| length | 245 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G281070 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 11583393 ~ 11583637 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU333091 | lncRNA | downstream | 21329 | 11561725 ~ 11562064 (-) | True | G281057 |
| TU333037 | lncRNA | downstream | 223757 | 11359362 ~ 11359636 (-) | True | G281021 |
| TU332834 | lncRNA | downstream | 323402 | 11259791 ~ 11259991 (-) | True | G280841 |
| TU332800 | lncRNA | downstream | 399250 | 11183066 ~ 11184143 (-) | True | G280818 |
| TU332799 | lncRNA | downstream | 401342 | 11179931 ~ 11182051 (-) | True | G280817 |
| TU333109 | lncRNA | upstream | 5366 | 11589003 ~ 11589687 (-) | True | G281075 |
| TU333143 | lncRNA | upstream | 124053 | 11707690 ~ 11710984 (-) | True | G281102 |
| TU333155 | lncRNA | upstream | 156093 | 11739730 ~ 11752892 (-) | False | dusp16 |
| TU333441 | lncRNA | upstream | 449459 | 12033096 ~ 12036362 (-) | True | G281362 |
| TU333459 | lncRNA | upstream | 510220 | 12093857 ~ 12094059 (-) | True | G281373 |
| XM_026923559.2 | mRNA | downstream | 91124 | 11487504 ~ 11492269 (-) | False | foxm1 |
| XM_026923557.2 | mRNA | downstream | 91124 | 11487504 ~ 11492269 (-) | False | foxm1 |
| XM_026923558.2 | mRNA | downstream | 91373 | 11487504 ~ 11492020 (-) | True | foxm1 |
| XM_034313375.1 | mRNA | downstream | 113757 | 11462894 ~ 11469636 (-) | False | pgm3 |
| XM_026922681.2 | mRNA | downstream | 113762 | 11461887 ~ 11469631 (-) | True | pgm3 |
| XM_026923415.2 | mRNA | upstream | 6176 | 11589813 ~ 11596577 (-) | True | ada2b |
| XM_026923285.2 | mRNA | upstream | 13131 | 11596768 ~ 11601405 (-) | True | atp6v1e1b |
| XM_026923353.2 | mRNA | upstream | 26496 | 11610133 ~ 11639731 (-) | False | snap91b |
| XM_026923355.2 | mRNA | upstream | 26496 | 11610133 ~ 11639731 (-) | False | snap91b |
| XM_034313280.1 | mRNA | upstream | 26496 | 11610133 ~ 11639731 (-) | False | snap91b |
| TU332827 | other | downstream | 324001 | 11238935 ~ 11259392 (-) | True | vegfab |
| XR_004579975.1 | other | downstream | 576250 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU332243 | other | downstream | 1287272 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
| trnay-gua_2 | other | downstream | 1960774 | 9622533 ~ 9622619 (-) | True | trnay-gua_2 |
| TU331209 | other | downstream | 2374830 | 9207351 ~ 9208563 (-) | True | G279415 |
| TU333108 | other | upstream | 2667 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU333129 | other | upstream | 74253 | 11657890 ~ 11660327 (-) | True | G281092 |
| XR_003403346.2 | other | upstream | 997286 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU335292 | other | upstream | 3590711 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| TU336422 | other | upstream | 5374887 | 16958524 ~ 16964887 (-) | True | phf21b |
