Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU335298 |
| length | 207 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G282950 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 15270994 ~ 15271200 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403333.2 | lncRNA | downstream | 57739 | 15209348 ~ 15213255 (-) | False | LOC113532334 |
| XR_003403332.2 | lncRNA | downstream | 57739 | 15209348 ~ 15213255 (-) | True | LOC113532334 |
| TU335044 | lncRNA | downstream | 164999 | 14812922 ~ 15105995 (-) | True | G282718 |
| TU334999 | lncRNA | downstream | 531557 | 14739216 ~ 14739437 (-) | True | G282673 |
| TU334974 | lncRNA | downstream | 539990 | 14715045 ~ 14731004 (-) | False | G282649 |
| TU335356 | lncRNA | upstream | 79506 | 15350706 ~ 15353441 (-) | True | G282999 |
| TU335389 | lncRNA | upstream | 116748 | 15387948 ~ 15390101 (-) | True | G283022 |
| TU335461 | lncRNA | upstream | 246024 | 15517224 ~ 15521690 (-) | True | G283081 |
| TU335610 | lncRNA | upstream | 483117 | 15754317 ~ 15754605 (-) | True | G283218 |
| TU335704 | lncRNA | upstream | 771162 | 16042362 ~ 16042579 (-) | True | G283307 |
| XM_034313258.1 | mRNA | downstream | 7601 | 15236542 ~ 15263393 (-) | False | LOC113532267 |
| XM_026923565.2 | mRNA | downstream | 7601 | 15236542 ~ 15263393 (-) | True | LOC113532267 |
| XM_026923534.2 | mRNA | downstream | 34684 | 15213936 ~ 15236310 (-) | True | LOC113532243 |
| XM_034313143.1 | mRNA | downstream | 86919 | 15139925 ~ 15184075 (-) | True | LOC113531972 |
| XM_026923156.2 | mRNA | downstream | 132517 | 15122734 ~ 15138477 (-) | False | LOC113532053 |
| XM_034313283.1 | mRNA | upstream | 54173 | 15325373 ~ 15336933 (-) | False | LOC113532250 |
| XM_034313284.1 | mRNA | upstream | 54173 | 15325373 ~ 15333836 (-) | False | LOC113532250 |
| XM_026923541.2 | mRNA | upstream | 54173 | 15325373 ~ 15333811 (-) | True | LOC113532250 |
| XM_026923726.2 | mRNA | upstream | 267857 | 15539057 ~ 15544883 (-) | True | alg10 |
| XM_026923836.2 | mRNA | upstream | 283073 | 15554273 ~ 15563716 (-) | False | srr |
| TU335292 | other | downstream | 93381 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| XR_003403346.2 | other | downstream | 2689931 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 3610667 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 3682970 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 4011602 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU336422 | other | upstream | 1687324 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 1832365 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 2707585 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 2707585 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| XR_004580005.1 | other | upstream | 2799547 | 18070747 ~ 18082361 (-) | False | tmem209 |
