Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU335704 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G283307 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 16042362 ~ 16042579 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU335610 | lncRNA | downstream | 287757 | 15754317 ~ 15754605 (-) | True | G283218 |
| TU335461 | lncRNA | downstream | 520672 | 15517224 ~ 15521690 (-) | True | G283081 |
| TU335389 | lncRNA | downstream | 652261 | 15387948 ~ 15390101 (-) | True | G283022 |
| TU335356 | lncRNA | downstream | 688921 | 15350706 ~ 15353441 (-) | True | G282999 |
| TU335298 | lncRNA | downstream | 771162 | 15270994 ~ 15271200 (-) | True | G282950 |
| XR_004579867.1 | lncRNA | upstream | 36189 | 16078768 ~ 16082121 (-) | True | LOC117599449 |
| TU335902 | lncRNA | upstream | 196936 | 16239515 ~ 16239901 (-) | True | G283503 |
| XR_003403336.2 | lncRNA | upstream | 252301 | 16294880 ~ 16296190 (-) | True | LOC113532372 |
| TU335937 | lncRNA | upstream | 358342 | 16400921 ~ 16401948 (-) | False | alg12 |
| TU335947 | lncRNA | upstream | 405860 | 16448439 ~ 16448775 (-) | False | G283546 |
| XM_034313186.1 | mRNA | downstream | 263418 | 15756306 ~ 15778944 (-) | False | cerk |
| XM_026923051.2 | mRNA | downstream | 263420 | 15756306 ~ 15778942 (-) | True | cerk |
| XM_026923836.2 | mRNA | downstream | 478646 | 15554273 ~ 15563716 (-) | False | srr |
| XM_034313341.1 | mRNA | downstream | 480676 | 15554273 ~ 15561686 (-) | True | srr |
| XM_026923726.2 | mRNA | downstream | 497479 | 15539057 ~ 15544883 (-) | True | alg10 |
| XM_034313343.1 | mRNA | upstream | 327090 | 16369669 ~ 16389481 (-) | True | brd1a |
| XM_034313344.1 | mRNA | upstream | 358628 | 16401207 ~ 16406863 (-) | True | alg12 |
| XM_026922599.2 | mRNA | upstream | 407207 | 16449786 ~ 16452939 (-) | True | LOC113531729 |
| XM_026922749.2 | mRNA | upstream | 526116 | 16568695 ~ 16581436 (-) | True | il17rel |
| XM_026922863.2 | mRNA | upstream | 579524 | 16622103 ~ 16647682 (-) | False | LOC113531895 |
| TU335292 | other | downstream | 864749 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| XR_003403346.2 | other | downstream | 3461299 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 4382035 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 4454338 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 4782970 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU336422 | other | upstream | 915945 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 1060986 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 1936206 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 1936206 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| XR_004580005.1 | other | upstream | 2028168 | 18070747 ~ 18082361 (-) | False | tmem209 |
