Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU335947 |
| length | 337 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G283546 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 16448439 ~ 16449766 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU335937 | lncRNA | downstream | 46491 | 16400921 ~ 16401948 (-) | False | alg12 |
| XR_003403336.2 | lncRNA | downstream | 152249 | 16294880 ~ 16296190 (-) | True | LOC113532372 |
| TU335902 | lncRNA | downstream | 208538 | 16239515 ~ 16239901 (-) | True | G283503 |
| XR_004579867.1 | lncRNA | downstream | 366318 | 16078768 ~ 16082121 (-) | True | LOC117599449 |
| TU335704 | lncRNA | downstream | 405860 | 16042362 ~ 16042579 (-) | True | G283307 |
| TU335946 | lncRNA | upstream | 242 | 16449017 ~ 16449766 (-) | False | G283546 |
| XR_004579992.1 | lncRNA | upstream | 169937 | 16618712 ~ 16619718 (-) | True | LOC117599589 |
| TU336181 | lncRNA | upstream | 389760 | 16838535 ~ 16849762 (-) | False | LOC113532230 |
| TU336452 | lncRNA | upstream | 592852 | 17041627 ~ 17043280 (-) | True | G284003 |
| TU336615 | lncRNA | upstream | 1058101 | 17506876 ~ 17507145 (-) | True | G284131 |
| XM_034313344.1 | mRNA | downstream | 41576 | 16401207 ~ 16406863 (-) | True | alg12 |
| XM_034313343.1 | mRNA | downstream | 58958 | 16369669 ~ 16389481 (-) | True | brd1a |
| XM_034313186.1 | mRNA | downstream | 669495 | 15756306 ~ 15778944 (-) | False | cerk |
| XM_026923051.2 | mRNA | downstream | 669497 | 15756306 ~ 15778942 (-) | True | cerk |
| XM_026923836.2 | mRNA | downstream | 884723 | 15554273 ~ 15563716 (-) | False | srr |
| XM_026922599.2 | mRNA | upstream | 1011 | 16449786 ~ 16452939 (-) | True | LOC113531729 |
| XM_026922749.2 | mRNA | upstream | 119920 | 16568695 ~ 16581436 (-) | True | il17rel |
| XM_026922863.2 | mRNA | upstream | 173328 | 16622103 ~ 16647682 (-) | False | LOC113531895 |
| XM_026922862.2 | mRNA | upstream | 173328 | 16622103 ~ 16647682 (-) | False | LOC113531895 |
| XM_026922861.2 | mRNA | upstream | 173328 | 16622103 ~ 16647682 (-) | True | LOC113531895 |
| TU335292 | other | downstream | 1270826 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| XR_003403346.2 | other | downstream | 3867376 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 4788112 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 4860415 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 5189047 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU336422 | other | upstream | 509749 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 654790 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 1530010 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 1530010 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| XR_004580005.1 | other | upstream | 1621972 | 18070747 ~ 18082361 (-) | False | tmem209 |
