Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU74905 |
| length | 1209 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 3 |
| gene id | LOC113539775 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 12272218 ~ 12277669 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74852 | lncRNA | downstream | 149362 | 12067332 ~ 12123010 (-) | True | G63174 |
| TU74721 | lncRNA | downstream | 268053 | 12004007 ~ 12004319 (-) | True | G63062 |
| TU74717 | lncRNA | downstream | 299425 | 11972711 ~ 11972947 (-) | True | G63058 |
| TU74670 | lncRNA | downstream | 305476 | 11936771 ~ 11966896 (-) | False | htr2cl1 |
| TU74690 | lncRNA | downstream | 374271 | 11897845 ~ 11898101 (-) | True | G63031 |
| TU74923 | lncRNA | upstream | 47848 | 12325460 ~ 12325671 (-) | True | G63219 |
| TU74974 | lncRNA | upstream | 76780 | 12354392 ~ 12355772 (-) | True | G63267 |
| TU75090 | lncRNA | upstream | 207262 | 12484874 ~ 12489553 (-) | False | tmem256 |
| TU75226 | lncRNA | upstream | 389829 | 12667441 ~ 12670500 (-) | True | G63502 |
| TU75293 | lncRNA | upstream | 432017 | 12709629 ~ 12709841 (-) | True | G63555 |
| XM_026937070.2 | mRNA | downstream | 3155 | 12267437 ~ 12269217 (-) | True | LOC113540514 |
| XM_026937071.2 | mRNA | downstream | 3216 | 12267437 ~ 12269156 (-) | False | LOC113540514 |
| XM_026936202.2 | mRNA | downstream | 6419 | 12263981 ~ 12265953 (-) | True | ponzr4 |
| XM_026936083.2 | mRNA | downstream | 8883 | 12260736 ~ 12263489 (-) | True | LOC113539944 |
| XM_034303416.1 | mRNA | downstream | 15857 | 12253245 ~ 12256515 (-) | True | ugt5g1 |
| XM_026935818.2 | mRNA | upstream | 1077 | 12278689 ~ 12284886 (-) | True | LOC113539774 |
| XM_026935848.2 | mRNA | upstream | 18299 | 12295911 ~ 12302454 (-) | True | cldn7a |
| XM_026936949.2 | mRNA | upstream | 31919 | 12309531 ~ 12323246 (-) | True | chrnb1l |
| XM_034303436.1 | mRNA | upstream | 32546 | 12310158 ~ 12323429 (-) | False | chrnb1l |
| XM_034303437.1 | mRNA | upstream | 32566 | 12310178 ~ 12323246 (-) | False | chrnb1l |
| TU74889 | other | downstream | 23316 | 12247274 ~ 12249056 (-) | False | si:dkey-165a24.9 |
| TU74378 | other | downstream | 737359 | 11533764 ~ 11535013 (-) | False | LOC117597110 |
| XR_003404120.1 | other | downstream | 1057950 | 11214322 ~ 11214422 (-) | True | LOC113540752 |
| XR_003404119.1 | other | downstream | 1059438 | 11212834 ~ 11212934 (-) | True | LOC113540751 |
| XR_003404121.1 | other | downstream | 1063539 | 11208733 ~ 11208833 (-) | True | LOC113540753 |
| XR_003404098.1 | other | upstream | 926661 | 13204273 ~ 13204462 (-) | True | LOC113540725 |
| XR_003404087.1 | other | upstream | 1626219 | 13903831 ~ 13904021 (-) | True | LOC113540713 |
| XR_003404068.1 | other | upstream | 1630225 | 13907837 ~ 13908000 (-) | True | LOC113540694 |
| XR_004578131.1 | other | upstream | 1631555 | 13909167 ~ 13909357 (-) | True | LOC113540747 |
| TU76338 | other | upstream | 1955197 | 14232809 ~ 14243681 (-) | True | G64436 |
