Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU75587 |
| length | 868 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G63817 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 13116073 ~ 13116940 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578117.1 | lncRNA | downstream | 164978 | 12941670 ~ 12951095 (-) | True | LOC117597210 |
| TU75331 | lncRNA | downstream | 243731 | 12799166 ~ 12872342 (-) | True | G63580 |
| TU75327 | lncRNA | downstream | 318732 | 12768682 ~ 12797341 (-) | True | G63578 |
| TU75329 | lncRNA | downstream | 343279 | 12767949 ~ 12772794 (-) | False | G63578 |
| TU75293 | lncRNA | downstream | 406232 | 12709629 ~ 12709841 (-) | True | G63555 |
| TU75558 | lncRNA | upstream | 77122 | 13194062 ~ 13195881 (-) | True | G63789 |
| TU75556 | lncRNA | upstream | 82079 | 13199019 ~ 13199909 (-) | True | G63787 |
| TU75618 | lncRNA | upstream | 91513 | 13208453 ~ 13214236 (-) | True | LOC113540062 |
| XR_003403993.2 | lncRNA | upstream | 92487 | 13209427 ~ 13214085 (-) | False | LOC113540062 |
| TU75563 | lncRNA | upstream | 115793 | 13232733 ~ 13234948 (-) | True | G63793 |
| XM_026936940.2 | mRNA | downstream | 379555 | 12734646 ~ 12736518 (-) | True | pop7 |
| XM_034303407.1 | mRNA | downstream | 379690 | 12734646 ~ 12736383 (-) | False | pop7 |
| XM_026937075.2 | mRNA | downstream | 403229 | 12710191 ~ 12712844 (-) | True | ufsp1 |
| XM_034303764.1 | mRNA | downstream | 409029 | 12697759 ~ 12707044 (-) | True | LOC113540289 |
| XM_034303765.1 | mRNA | downstream | 424235 | 12680361 ~ 12691838 (-) | True | LOC117597087 |
| XM_026936247.2 | mRNA | upstream | 99960 | 13216900 ~ 13223130 (-) | True | bcl6b |
| XM_034303958.1 | mRNA | upstream | 125729 | 13242669 ~ 13243766 (-) | True | sst5 |
| XM_026936178.2 | mRNA | upstream | 147331 | 13264271 ~ 13267825 (-) | True | tm4sf5 |
| XM_034303429.1 | mRNA | upstream | 169322 | 13286262 ~ 13308475 (-) | True | acap1 |
| XM_034303430.1 | mRNA | upstream | 173036 | 13289976 ~ 13308478 (-) | False | acap1 |
| TU74901 | other | downstream | 838404 | 12272372 ~ 12277669 (-) | False | LOC113539775 |
| TU74900 | other | downstream | 838461 | 12272218 ~ 12277612 (-) | True | LOC113539775 |
| TU74899 | other | downstream | 838461 | 12272372 ~ 12277612 (-) | False | LOC113539775 |
| TU74889 | other | downstream | 867017 | 12247274 ~ 12249056 (-) | False | si:dkey-165a24.9 |
| TU74378 | other | downstream | 1581060 | 11533764 ~ 11535013 (-) | False | LOC117597110 |
| XR_003404098.1 | other | upstream | 87333 | 13204273 ~ 13204462 (-) | True | LOC113540725 |
| XR_003404087.1 | other | upstream | 786891 | 13903831 ~ 13904021 (-) | True | LOC113540713 |
| XR_003404068.1 | other | upstream | 790897 | 13907837 ~ 13908000 (-) | True | LOC113540694 |
| XR_004578131.1 | other | upstream | 792227 | 13909167 ~ 13909357 (-) | True | LOC113540747 |
| TU76338 | other | upstream | 1115869 | 14232809 ~ 14243681 (-) | True | G64436 |
