Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU75643 |
| length | 1239 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G63866 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 13278536 ~ 13279774 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU75628 | lncRNA | downstream | 19168 | 13251983 ~ 13259368 (-) | True | LOC113540618 |
| XR_003404051.2 | lncRNA | downstream | 19243 | 13251977 ~ 13259293 (-) | False | LOC113540618 |
| TU75563 | lncRNA | downstream | 43588 | 13232733 ~ 13234948 (-) | True | G63793 |
| TU75618 | lncRNA | downstream | 64300 | 13208453 ~ 13214236 (-) | True | LOC113540062 |
| XR_003403993.2 | lncRNA | downstream | 64451 | 13209427 ~ 13214085 (-) | False | LOC113540062 |
| TU75638 | lncRNA | upstream | 6225 | 13285999 ~ 13289460 (-) | False | acap1 |
| TU75706 | lncRNA | upstream | 138538 | 13418312 ~ 13418530 (-) | True | G63913 |
| TU75713 | lncRNA | upstream | 156282 | 13436056 ~ 13439629 (-) | True | zgc:194312 |
| TU75716 | lncRNA | upstream | 162755 | 13442529 ~ 13442830 (-) | True | G63920 |
| TU75701 | lncRNA | upstream | 168181 | 13447955 ~ 13466718 (-) | True | G63908 |
| XM_026936178.2 | mRNA | downstream | 10711 | 13264271 ~ 13267825 (-) | True | tm4sf5 |
| XM_034303958.1 | mRNA | downstream | 34770 | 13242669 ~ 13243766 (-) | True | sst5 |
| XM_026936247.2 | mRNA | downstream | 55406 | 13216900 ~ 13223130 (-) | True | bcl6b |
| XM_026936940.2 | mRNA | downstream | 542018 | 12734646 ~ 12736518 (-) | True | pop7 |
| XM_034303407.1 | mRNA | downstream | 542153 | 12734646 ~ 12736383 (-) | False | pop7 |
| XM_034303429.1 | mRNA | upstream | 6488 | 13286262 ~ 13308475 (-) | True | acap1 |
| XM_034303430.1 | mRNA | upstream | 10202 | 13289976 ~ 13308478 (-) | False | acap1 |
| XM_026935899.2 | mRNA | upstream | 108559 | 13388333 ~ 13389965 (-) | True | si:ch73-335l21.4 |
| XM_026936415.2 | mRNA | upstream | 157313 | 13437087 ~ 13440520 (-) | False | zgc:194312 |
| XM_026936111.2 | mRNA | upstream | 225967 | 13505741 ~ 13521526 (-) | True | ntn5 |
| XR_003404098.1 | other | downstream | 74074 | 13204273 ~ 13204462 (-) | True | LOC113540725 |
| TU74901 | other | downstream | 1000867 | 12272372 ~ 12277669 (-) | False | LOC113539775 |
| TU74900 | other | downstream | 1000924 | 12272218 ~ 12277612 (-) | True | LOC113539775 |
| TU74899 | other | downstream | 1000924 | 12272372 ~ 12277612 (-) | False | LOC113539775 |
| TU74889 | other | downstream | 1029480 | 12247274 ~ 12249056 (-) | False | si:dkey-165a24.9 |
| XR_003404087.1 | other | upstream | 624057 | 13903831 ~ 13904021 (-) | True | LOC113540713 |
| XR_003404068.1 | other | upstream | 628063 | 13907837 ~ 13908000 (-) | True | LOC113540694 |
| XR_004578131.1 | other | upstream | 629393 | 13909167 ~ 13909357 (-) | True | LOC113540747 |
| TU76338 | other | upstream | 953035 | 14232809 ~ 14243681 (-) | True | G64436 |
| trnae-cuc_13 | other | upstream | 1454882 | 14734656 ~ 14734727 (-) | True | trnae-cuc_13 |
