Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU76201 |
| length | 356 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G64305 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 14016595 ~ 14016950 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU76191 | lncRNA | downstream | 16912 | 13998735 ~ 13999683 (-) | True | G64296 |
| TU76189 | lncRNA | downstream | 20196 | 13992571 ~ 13996399 (-) | True | G64294 |
| TU76141 | lncRNA | downstream | 104775 | 13902924 ~ 13911820 (-) | False | G64252 |
| XR_003404036.2 | lncRNA | downstream | 104840 | 13902898 ~ 13911755 (-) | True | LOC113540541 |
| TU76139 | lncRNA | downstream | 107290 | 13902924 ~ 13909305 (-) | False | G64252 |
| TU76186 | lncRNA | upstream | 23716 | 14040666 ~ 14041288 (-) | True | G64291 |
| TU76336 | lncRNA | upstream | 161624 | 14178574 ~ 14230828 (-) | True | G64434 |
| TU76343 | lncRNA | upstream | 233661 | 14250611 ~ 14253763 (-) | True | G64440 |
| TU76369 | lncRNA | upstream | 278544 | 14295494 ~ 14295699 (-) | True | G64461 |
| XR_004578094.1 | lncRNA | upstream | 605086 | 14622036 ~ 14632753 (-) | True | LOC117597192 |
| XM_026936919.2 | mRNA | downstream | 48684 | 13912683 ~ 13967911 (-) | True | sema4f |
| XM_026936327.2 | mRNA | downstream | 219150 | 13747239 ~ 13797445 (-) | False | col4a5 |
| XM_026936326.2 | mRNA | downstream | 219150 | 13747239 ~ 13797445 (-) | True | col4a5 |
| XM_034303949.1 | mRNA | downstream | 219150 | 13753798 ~ 13797445 (-) | False | col4a5 |
| XM_026936261.2 | mRNA | downstream | 321595 | 13684736 ~ 13695000 (-) | True | usp12b |
| XM_026936736.2 | mRNA | upstream | 1508 | 14018458 ~ 14033040 (-) | True | dok1b |
| XM_026936012.2 | mRNA | upstream | 25001 | 14041951 ~ 14054035 (-) | True | LOC113539907 |
| XM_026936443.2 | mRNA | upstream | 62755 | 14079705 ~ 14086981 (-) | True | cct7 |
| XM_034303617.1 | mRNA | upstream | 140486 | 14157436 ~ 14220288 (-) | False | plcb3 |
| XM_034303616.1 | mRNA | upstream | 140486 | 14157436 ~ 14220286 (-) | True | plcb3 |
| XR_004578131.1 | other | downstream | 107238 | 13909167 ~ 13909357 (-) | True | LOC113540747 |
| XR_003404068.1 | other | downstream | 108595 | 13907837 ~ 13908000 (-) | True | LOC113540694 |
| XR_003404087.1 | other | downstream | 112574 | 13903831 ~ 13904021 (-) | True | LOC113540713 |
| XR_003404098.1 | other | downstream | 812133 | 13204273 ~ 13204462 (-) | True | LOC113540725 |
| TU74901 | other | downstream | 1738926 | 12272372 ~ 12277669 (-) | False | LOC113539775 |
| TU76338 | other | upstream | 215859 | 14232809 ~ 14243681 (-) | True | G64436 |
| trnae-cuc_13 | other | upstream | 717706 | 14734656 ~ 14734727 (-) | True | trnae-cuc_13 |
| trnap-ugg_2 | other | upstream | 1858877 | 15875827 ~ 15875898 (-) | True | trnap-ugg_2 |
| XR_004578098.1 | other | upstream | 1862521 | 15879471 ~ 15904355 (-) | False | tbc1d19 |
| XR_004577994.1 | other | upstream | 1956629 | 15973579 ~ 15991885 (-) | False | smim20 |
