Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU76869 |
| length | 872 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G64929 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 14967207 ~ 14968539 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU76798 | lncRNA | downstream | 105008 | 14861924 ~ 14862199 (-) | True | G64860 |
| XR_004578094.1 | lncRNA | downstream | 334454 | 14622036 ~ 14632753 (-) | True | LOC117597192 |
| TU76369 | lncRNA | downstream | 671508 | 14295494 ~ 14295699 (-) | True | G64461 |
| TU76343 | lncRNA | downstream | 713444 | 14250611 ~ 14253763 (-) | True | G64440 |
| TU76336 | lncRNA | downstream | 736379 | 14178574 ~ 14230828 (-) | True | G64434 |
| TU76907 | lncRNA | upstream | 232759 | 15201298 ~ 15201545 (-) | True | G64964 |
| TU77240 | lncRNA | upstream | 937555 | 15906094 ~ 15960367 (-) | True | G65253 |
| TU77249 | lncRNA | upstream | 955915 | 15924454 ~ 15925161 (-) | True | G65260 |
| TU77256 | lncRNA | upstream | 1013197 | 15981736 ~ 15982273 (-) | True | G65267 |
| TU77227 | lncRNA | upstream | 1021010 | 15989549 ~ 15991516 (-) | True | smim20 |
| XM_034303872.1 | mRNA | downstream | 74052 | 14875694 ~ 14893155 (-) | False | dthd1 |
| XM_034303871.1 | mRNA | downstream | 77818 | 14875695 ~ 14889389 (-) | False | dthd1 |
| XM_026936681.2 | mRNA | downstream | 80795 | 14875695 ~ 14886412 (-) | True | dthd1 |
| XM_026936682.2 | mRNA | downstream | 80798 | 14875697 ~ 14886409 (-) | False | dthd1 |
| XM_026935919.2 | mRNA | downstream | 92655 | 14841473 ~ 14874552 (-) | True | per1b |
| XM_026936693.2 | mRNA | upstream | 342090 | 15310629 ~ 15445772 (-) | True | pcdh7b |
| XM_026937207.2 | mRNA | upstream | 857519 | 15826058 ~ 15875484 (-) | True | stim2b |
| XM_034304110.1 | mRNA | upstream | 910932 | 15879471 ~ 15904267 (-) | False | tbc1d19 |
| XM_026936113.2 | mRNA | upstream | 910933 | 15879472 ~ 15904355 (-) | True | tbc1d19 |
| XM_026936418.2 | mRNA | upstream | 950309 | 15918848 ~ 15963968 (-) | False | rbpjb |
| trnae-cuc_13 | other | downstream | 232480 | 14734656 ~ 14734727 (-) | True | trnae-cuc_13 |
| TU76338 | other | downstream | 723526 | 14232809 ~ 14243681 (-) | True | G64436 |
| XR_004578131.1 | other | downstream | 1057850 | 13909167 ~ 13909357 (-) | True | LOC113540747 |
| XR_003404068.1 | other | downstream | 1059207 | 13907837 ~ 13908000 (-) | True | LOC113540694 |
| XR_003404087.1 | other | downstream | 1063186 | 13903831 ~ 13904021 (-) | True | LOC113540713 |
| trnap-ugg_2 | other | upstream | 907288 | 15875827 ~ 15875898 (-) | True | trnap-ugg_2 |
| XR_004578098.1 | other | upstream | 910932 | 15879471 ~ 15904355 (-) | False | tbc1d19 |
| XR_004577994.1 | other | upstream | 1005040 | 15973579 ~ 15991885 (-) | False | smim20 |
| XR_003404041.2 | other | upstream | 1086483 | 16055022 ~ 16071692 (-) | False | acox3 |
| TU77497 | other | upstream | 1450771 | 16419310 ~ 16423164 (-) | True | tnfsf12 |
