Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU79253 |
| length | 850 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G66864 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 18856456 ~ 18858652 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU79242 | lncRNA | upstream | 22629 | 18828179 ~ 18833827 (+) | True | G66855 |
| TU79140 | lncRNA | upstream | 187206 | 18669042 ~ 18669250 (+) | True | G66754 |
| TU79045 | lncRNA | upstream | 364875 | 18491372 ~ 18491581 (+) | True | G66670 |
| TU79026 | lncRNA | upstream | 425320 | 18430562 ~ 18431136 (+) | True | G66654 |
| TU79006 | lncRNA | upstream | 474294 | 18381956 ~ 18382162 (+) | True | G66637 |
| TU79254 | lncRNA | downstream | 390 | 18859042 ~ 18862711 (+) | False | G66865 |
| TU79255 | lncRNA | downstream | 552 | 18859204 ~ 18863417 (+) | True | G66865 |
| TU79288 | lncRNA | downstream | 50994 | 18909646 ~ 18910488 (+) | True | G66888 |
| TU79287 | lncRNA | downstream | 52405 | 18911057 ~ 18911397 (+) | True | G66887 |
| XR_003404012.2 | lncRNA | downstream | 262186 | 19120838 ~ 19122020 (+) | False | LOC113540244 |
| XM_026936168.2 | mRNA | upstream | 4876 | 18849165 ~ 18851580 (+) | True | sod3a |
| XM_026936118.2 | mRNA | upstream | 426097 | 18426358 ~ 18430359 (+) | True | gba3 |
| XM_034304071.1 | mRNA | upstream | 612659 | 18221624 ~ 18243797 (+) | True | sec24d |
| XM_034303317.1 | mRNA | upstream | 712825 | 18113433 ~ 18143631 (+) | False | frem1a |
| XM_026935846.2 | mRNA | upstream | 712825 | 18113444 ~ 18143631 (+) | True | frem1a |
| XM_034303649.1 | mRNA | downstream | 92395 | 18951047 ~ 18954000 (+) | True | ppp1r15a |
| XM_034303737.1 | mRNA | downstream | 312047 | 19170699 ~ 19327377 (+) | False | LOC113540597 |
| XM_026937175.2 | mRNA | downstream | 312047 | 19170699 ~ 19327377 (+) | True | LOC113540597 |
| XM_026937171.2 | mRNA | downstream | 312047 | 19170699 ~ 19327377 (+) | False | LOC113540597 |
| XM_034303739.1 | mRNA | downstream | 312047 | 19170699 ~ 19327377 (+) | False | LOC113540597 |
| TU78855 | other | upstream | 647892 | 18197312 ~ 18208564 (+) | True | G66492 |
| XR_004577948.1 | other | upstream | 725951 | 18113444 ~ 18130505 (+) | False | frem1a |
| XR_003403977.2 | other | upstream | 845494 | 18000158 ~ 18010962 (+) | False | ctdnep1b |
| trnat-agu | other | upstream | 1091922 | 17764461 ~ 17764534 (+) | True | trnat-agu |
| TU78354 | other | upstream | 1236377 | 17609704 ~ 17620079 (+) | True | LOC113539940 |
| trnah-gug_4 | other | downstream | 969659 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| trnah-gug_5 | other | downstream | 970167 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnar-ucu_2 | other | downstream | 1242373 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| TU80337 | other | downstream | 1289143 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnaa-cgc | other | downstream | 1493762 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
