Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU80746 |
| length | 296 |
| lncRNA type | inter_gene |
| GC content | 0.27 |
| exon number | 1 |
| gene id | G68108 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 20635904 ~ 20636199 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80745 | lncRNA | downstream | 111 | 20635532 ~ 20635793 (-) | True | G68107 |
| TU80738 | lncRNA | downstream | 4194 | 20630166 ~ 20631710 (-) | True | G68106 |
| TU80707 | lncRNA | downstream | 64974 | 20570399 ~ 20570930 (-) | True | G68080 |
| TU80702 | lncRNA | downstream | 69146 | 20559378 ~ 20566758 (-) | True | G68075 |
| TU80460 | lncRNA | downstream | 308343 | 20297322 ~ 20327561 (-) | True | G67891 |
| TU80832 | lncRNA | upstream | 142354 | 20778553 ~ 20816280 (-) | False | znf16l |
| TU80840 | lncRNA | upstream | 167218 | 20803417 ~ 20804104 (-) | True | G68186 |
| TU81181 | lncRNA | upstream | 668565 | 21304764 ~ 21313873 (-) | False | chchd7 |
| TU81229 | lncRNA | upstream | 684619 | 21320818 ~ 21321146 (-) | True | G68466 |
| TU81220 | lncRNA | upstream | 689877 | 21326076 ~ 21329250 (-) | True | G68462 |
| XM_026937254.2 | mRNA | downstream | 131496 | 20497680 ~ 20504408 (-) | True | ecsit |
| XM_026936378.2 | mRNA | downstream | 150246 | 20479260 ~ 20485658 (-) | True | si:dkey-106g10.7 |
| XM_026937198.2 | mRNA | downstream | 180442 | 20447657 ~ 20455462 (-) | False | men1 |
| XM_034304099.1 | mRNA | downstream | 180442 | 20447657 ~ 20455462 (-) | False | men1 |
| XM_026937199.2 | mRNA | downstream | 181287 | 20447256 ~ 20454617 (-) | True | men1 |
| XM_026935869.2 | mRNA | upstream | 25527 | 20661726 ~ 20677144 (-) | True | peli3 |
| XM_034303290.1 | mRNA | upstream | 25527 | 20661726 ~ 20675403 (-) | False | peli3 |
| XM_026936122.2 | mRNA | upstream | 119677 | 20755876 ~ 20768426 (-) | True | sstr1b |
| XM_026935805.2 | mRNA | upstream | 142339 | 20778538 ~ 20825520 (-) | True | znf16l |
| XM_026935868.2 | mRNA | upstream | 199562 | 20835761 ~ 20838098 (-) | True | LOC113539812 |
| XR_003404107.1 | other | downstream | 492015 | 20143784 ~ 20143889 (-) | True | LOC113540737 |
| TU80179 | other | downstream | 670066 | 19962616 ~ 19965838 (-) | False | snrpf |
| XR_004578057.1 | other | downstream | 692537 | 19931590 ~ 19943367 (-) | False | LOC113539792 |
| TU81225 | other | upstream | 689847 | 21326046 ~ 21329250 (-) | False | G68462 |
| XR_004578106.1 | other | upstream | 732051 | 21368250 ~ 21371010 (-) | False | LOC113539989 |
| XR_004578104.1 | other | upstream | 732051 | 21368250 ~ 21371010 (-) | True | LOC113539989 |
| XR_004578105.1 | other | upstream | 732051 | 21368250 ~ 21371004 (-) | False | LOC113539989 |
| trnaa-ugc | other | upstream | 781969 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
