Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU81181 |
| length | 727 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 4 |
| gene id | chchd7 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21304692 ~ 21313897 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80832 | lncRNA | downstream | 488484 | 20778553 ~ 20816280 (-) | False | znf16l |
| TU80840 | lncRNA | downstream | 500660 | 20803417 ~ 20804104 (-) | True | G68186 |
| TU80746 | lncRNA | downstream | 668565 | 20635904 ~ 20636199 (-) | True | G68108 |
| TU80745 | lncRNA | downstream | 668971 | 20635532 ~ 20635793 (-) | True | G68107 |
| TU80738 | lncRNA | downstream | 673054 | 20630166 ~ 20631710 (-) | True | G68106 |
| TU81229 | lncRNA | upstream | 6945 | 21320818 ~ 21321146 (-) | True | G68466 |
| TU81220 | lncRNA | upstream | 12203 | 21326076 ~ 21329250 (-) | True | G68462 |
| TU81222 | lncRNA | upstream | 12203 | 21326076 ~ 21329250 (-) | False | G68462 |
| TU81263 | lncRNA | upstream | 93238 | 21407111 ~ 21408207 (-) | True | G68495 |
| TU81290 | lncRNA | upstream | 157759 | 21471632 ~ 21471839 (-) | True | G68519 |
| XM_026936917.2 | mRNA | downstream | 56127 | 21235253 ~ 21248637 (-) | False | LOC113540421 |
| XM_026936918.2 | mRNA | downstream | 61259 | 21235253 ~ 21243505 (-) | True | LOC113540421 |
| XM_026936000.2 | mRNA | downstream | 71079 | 21227985 ~ 21233685 (-) | True | sdcbp |
| XM_034303722.1 | mRNA | downstream | 78780 | 21195948 ~ 21225984 (-) | False | unm_hu7910 |
| XM_034303721.1 | mRNA | downstream | 78780 | 21195948 ~ 21225984 (-) | False | unm_hu7910 |
| XM_026936370.2 | mRNA | upstream | 23235 | 21337108 ~ 21350811 (-) | True | LOC113540120 |
| XM_034304122.1 | mRNA | upstream | 40746 | 21354619 ~ 21371010 (-) | False | LOC113539989 |
| XM_034304123.1 | mRNA | upstream | 50052 | 21363925 ~ 21371010 (-) | False | LOC113539989 |
| XM_026936104.2 | mRNA | upstream | 62522 | 21376395 ~ 21379959 (-) | True | sox17 |
| XM_026937164.2 | mRNA | upstream | 85682 | 21399555 ~ 21401268 (-) | True | sox32 |
| XR_003404107.1 | other | downstream | 1160875 | 20143784 ~ 20143889 (-) | True | LOC113540737 |
| TU80179 | other | downstream | 1338926 | 19962616 ~ 19965838 (-) | False | snrpf |
| XR_004578057.1 | other | downstream | 1361397 | 19931590 ~ 19943367 (-) | False | LOC113539792 |
| TU81225 | other | upstream | 12173 | 21326046 ~ 21329250 (-) | False | G68462 |
| XR_004578106.1 | other | upstream | 54377 | 21368250 ~ 21371010 (-) | False | LOC113539989 |
| XR_004578104.1 | other | upstream | 54377 | 21368250 ~ 21371010 (-) | True | LOC113539989 |
| XR_004578105.1 | other | upstream | 54377 | 21368250 ~ 21371004 (-) | False | LOC113539989 |
| trnaa-ugc | other | upstream | 104295 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
