Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU81263 |
| length | 1097 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G68495 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21407111 ~ 21408207 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU81220 | lncRNA | downstream | 77861 | 21326076 ~ 21329250 (-) | True | G68462 |
| TU81222 | lncRNA | downstream | 77861 | 21326076 ~ 21329250 (-) | False | G68462 |
| TU81229 | lncRNA | downstream | 85965 | 21320818 ~ 21321146 (-) | True | G68466 |
| TU81181 | lncRNA | downstream | 93238 | 21304764 ~ 21313873 (-) | False | chchd7 |
| TU80832 | lncRNA | downstream | 590831 | 20778553 ~ 20816280 (-) | False | znf16l |
| TU81290 | lncRNA | upstream | 63425 | 21471632 ~ 21471839 (-) | True | G68519 |
| TU81291 | lncRNA | upstream | 64612 | 21472819 ~ 21473032 (-) | True | G68520 |
| TU81365 | lncRNA | upstream | 66380 | 21474587 ~ 21475776 (-) | True | G68577 |
| TU81377 | lncRNA | upstream | 88725 | 21496932 ~ 21501433 (-) | True | G68585 |
| TU81559 | lncRNA | upstream | 420066 | 21828273 ~ 21828833 (-) | True | G68740 |
| XM_026937164.2 | mRNA | downstream | 5843 | 21399555 ~ 21401268 (-) | True | sox32 |
| XM_026936104.2 | mRNA | downstream | 27152 | 21376395 ~ 21379959 (-) | True | sox17 |
| XM_034304122.1 | mRNA | downstream | 36101 | 21354619 ~ 21371010 (-) | False | LOC113539989 |
| XM_034304123.1 | mRNA | downstream | 36101 | 21363925 ~ 21371010 (-) | False | LOC113539989 |
| XM_026936370.2 | mRNA | downstream | 56300 | 21337108 ~ 21350811 (-) | True | LOC113540120 |
| XM_026936006.2 | mRNA | upstream | 5654 | 21413861 ~ 21417828 (-) | True | mrpl15 |
| XM_026936203.2 | mRNA | upstream | 18978 | 21427185 ~ 21430580 (-) | True | LOC113540027 |
| XM_026935849.2 | mRNA | upstream | 72408 | 21480615 ~ 21485813 (-) | True | fastkd3 |
| XM_026935851.2 | mRNA | upstream | 72408 | 21480615 ~ 21485666 (-) | False | fastkd3 |
| XM_026936692.2 | mRNA | upstream | 79980 | 21488187 ~ 21492336 (-) | True | myl12.1 |
| XR_004578106.1 | other | downstream | 36101 | 21368250 ~ 21371010 (-) | False | LOC113539989 |
| XR_004578104.1 | other | downstream | 36101 | 21368250 ~ 21371010 (-) | True | LOC113539989 |
| XR_004578105.1 | other | downstream | 36107 | 21368250 ~ 21371004 (-) | False | LOC113539989 |
| TU81225 | other | downstream | 77861 | 21326046 ~ 21329250 (-) | False | G68462 |
| XR_003404107.1 | other | downstream | 1263222 | 20143784 ~ 20143889 (-) | True | LOC113540737 |
| trnaa-ugc | other | upstream | 9961 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
| TU81579 | other | upstream | 526319 | 21934526 ~ 21935169 (-) | True | G68760 |
| TU82055 | other | upstream | 1223978 | 22632185 ~ 22635752 (-) | False | LOC113540019 |
| XR_004578082.1 | other | upstream | 1885744 | 23293951 ~ 23306934 (-) | False | lrrcc1 |
| LOC117597073 | other | upstream | 2071758 | 23479965 ~ 23483850 (-) | True | LOC117597073 |
