Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU81365 |
| length | 758 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | G68577 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21474587 ~ 21475776 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU81291 | lncRNA | downstream | 1555 | 21472819 ~ 21473032 (-) | True | G68520 |
| TU81290 | lncRNA | downstream | 2748 | 21471632 ~ 21471839 (-) | True | G68519 |
| TU81263 | lncRNA | downstream | 66380 | 21407111 ~ 21408207 (-) | True | G68495 |
| TU81220 | lncRNA | downstream | 145337 | 21326076 ~ 21329250 (-) | True | G68462 |
| TU81222 | lncRNA | downstream | 145337 | 21326076 ~ 21329250 (-) | False | G68462 |
| TU81377 | lncRNA | upstream | 21156 | 21496932 ~ 21501433 (-) | True | G68585 |
| TU81559 | lncRNA | upstream | 352497 | 21828273 ~ 21828833 (-) | True | G68740 |
| TU81560 | lncRNA | upstream | 354300 | 21830076 ~ 21830642 (-) | True | G68741 |
| TU81562 | lncRNA | upstream | 359446 | 21835222 ~ 21835426 (-) | True | G68743 |
| TU81563 | lncRNA | upstream | 359994 | 21835770 ~ 21835995 (-) | True | G68744 |
| XM_026936203.2 | mRNA | downstream | 44007 | 21427185 ~ 21430580 (-) | True | LOC113540027 |
| XM_026936006.2 | mRNA | downstream | 56759 | 21413861 ~ 21417828 (-) | True | mrpl15 |
| XM_026937164.2 | mRNA | downstream | 73319 | 21399555 ~ 21401268 (-) | True | sox32 |
| XM_026936104.2 | mRNA | downstream | 94628 | 21376395 ~ 21379959 (-) | True | sox17 |
| XM_034304123.1 | mRNA | downstream | 103577 | 21363925 ~ 21371010 (-) | False | LOC113539989 |
| XM_026935849.2 | mRNA | upstream | 4839 | 21480615 ~ 21485813 (-) | True | fastkd3 |
| XM_026935851.2 | mRNA | upstream | 4839 | 21480615 ~ 21485666 (-) | False | fastkd3 |
| XM_026936692.2 | mRNA | upstream | 12411 | 21488187 ~ 21492336 (-) | True | myl12.1 |
| XM_026935855.2 | mRNA | upstream | 78750 | 21554526 ~ 21580543 (-) | True | emilin2b |
| XM_026936632.2 | mRNA | upstream | 106446 | 21582222 ~ 21623632 (-) | True | smchd1 |
| trnaa-ugc | other | downstream | 56348 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
| XR_004578106.1 | other | downstream | 103577 | 21368250 ~ 21371010 (-) | False | LOC113539989 |
| XR_004578104.1 | other | downstream | 103577 | 21368250 ~ 21371010 (-) | True | LOC113539989 |
| XR_004578105.1 | other | downstream | 103583 | 21368250 ~ 21371004 (-) | False | LOC113539989 |
| TU81225 | other | downstream | 145337 | 21326046 ~ 21329250 (-) | False | G68462 |
| TU81579 | other | upstream | 458750 | 21934526 ~ 21935169 (-) | True | G68760 |
| TU82055 | other | upstream | 1156409 | 22632185 ~ 22635752 (-) | False | LOC113540019 |
| XR_004578082.1 | other | upstream | 1818175 | 23293951 ~ 23306934 (-) | False | lrrcc1 |
| LOC117597073 | other | upstream | 2004189 | 23479965 ~ 23483850 (-) | True | LOC117597073 |
| TU82584 | other | upstream | 2004276 | 23480052 ~ 23480566 (-) | False | LOC117597073 |
