Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU82001 |
| length | 1011 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G69128 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 22409603 ~ 22452697 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU81994 | lncRNA | downstream | 30070 | 22379295 ~ 22379533 (-) | True | G69124 |
| TU81751 | lncRNA | downstream | 220840 | 22188183 ~ 22188763 (-) | True | G68923 |
| TU81734 | lncRNA | downstream | 235629 | 22170080 ~ 22173974 (-) | True | G68907 |
| TU81577 | lncRNA | downstream | 463366 | 21945612 ~ 21946237 (-) | True | G68758 |
| TU81571 | lncRNA | downstream | 562875 | 21846385 ~ 21846728 (-) | True | G68752 |
| TU82004 | lncRNA | upstream | 525 | 22453222 ~ 22459488 (-) | True | G69131 |
| TU82012 | lncRNA | upstream | 53093 | 22505790 ~ 22512310 (-) | True | G69139 |
| TU82009 | lncRNA | upstream | 63007 | 22515704 ~ 22519266 (-) | True | G69136 |
| TU82054 | lncRNA | upstream | 176918 | 22629615 ~ 22631562 (-) | True | LOC113540019 |
| TU82062 | lncRNA | upstream | 197242 | 22649939 ~ 22652446 (-) | True | G69183 |
| XM_026935814.2 | mRNA | downstream | 48450 | 22358195 ~ 22361153 (-) | True | rgs9bp |
| XM_026936139.2 | mRNA | downstream | 55026 | 22346313 ~ 22354577 (-) | False | mcur1 |
| XM_026936140.2 | mRNA | downstream | 55027 | 22345935 ~ 22354576 (-) | True | mcur1 |
| XM_026936957.2 | mRNA | downstream | 63952 | 22338753 ~ 22345651 (-) | True | dph2 |
| XM_026936189.2 | mRNA | upstream | 17522 | 22470219 ~ 22482144 (-) | False | puf60b |
| XM_026936190.2 | mRNA | upstream | 17524 | 22470221 ~ 22482144 (-) | False | puf60b |
| XM_026936188.2 | mRNA | upstream | 17524 | 22470221 ~ 22482144 (-) | False | puf60b |
| XM_034303631.1 | mRNA | upstream | 17524 | 22470221 ~ 22479106 (-) | False | puf60b |
| XM_034303630.1 | mRNA | upstream | 17524 | 22470221 ~ 22479106 (-) | True | puf60b |
| TU81579 | other | downstream | 474434 | 21934526 ~ 21935169 (-) | True | G68760 |
| trnaa-ugc | other | downstream | 991364 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
| XR_004578106.1 | other | downstream | 1038593 | 21368250 ~ 21371010 (-) | False | LOC113539989 |
| TU82055 | other | upstream | 179488 | 22632185 ~ 22635752 (-) | False | LOC113540019 |
| XR_004578082.1 | other | upstream | 841254 | 23293951 ~ 23306934 (-) | False | lrrcc1 |
| LOC117597073 | other | upstream | 1027268 | 23479965 ~ 23483850 (-) | True | LOC117597073 |
| TU82584 | other | upstream | 1027355 | 23480052 ~ 23480566 (-) | False | LOC117597073 |
| TU82579 | other | upstream | 1040682 | 23493379 ~ 23493919 (-) | True | G69592 |
