Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU82055 |
| length | 632 |
| RNA type | TUCP |
| GC content | 0.42 |
| exon number | 2 |
| gene id | LOC113540019 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 22629615 ~ 22636088 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82054 | lncRNA | downstream | 623 | 22629615 ~ 22631562 (-) | True | LOC113540019 |
| TU82009 | lncRNA | downstream | 112919 | 22515704 ~ 22519266 (-) | True | G69136 |
| TU82012 | lncRNA | downstream | 119875 | 22505790 ~ 22512310 (-) | True | G69139 |
| TU82004 | lncRNA | downstream | 172697 | 22453222 ~ 22459488 (-) | True | G69131 |
| TU82001 | lncRNA | downstream | 179488 | 22409603 ~ 22452697 (-) | True | G69128 |
| TU82062 | lncRNA | upstream | 14187 | 22649939 ~ 22652446 (-) | True | G69183 |
| TU82063 | lncRNA | upstream | 14187 | 22649939 ~ 22650544 (-) | False | G69183 |
| TU82087 | lncRNA | upstream | 41624 | 22677376 ~ 22677918 (-) | True | G69203 |
| TU82121 | lncRNA | upstream | 135634 | 22771386 ~ 22772012 (-) | True | G69233 |
| TU82140 | lncRNA | upstream | 167634 | 22803386 ~ 22805908 (-) | True | G69248 |
| XM_026936866.2 | mRNA | downstream | 5162 | 22545958 ~ 22627023 (-) | False | ctnnd2b |
| XM_026936869.2 | mRNA | downstream | 5163 | 22545958 ~ 22627022 (-) | False | ctnnd2b |
| XM_026936865.2 | mRNA | downstream | 5163 | 22545958 ~ 22627022 (-) | False | ctnnd2b |
| XM_034303782.1 | mRNA | downstream | 5163 | 22545958 ~ 22627022 (-) | False | ctnnd2b |
| XM_034303783.1 | mRNA | downstream | 20484 | 22545958 ~ 22611701 (-) | False | ctnnd2b |
| XM_034303845.1 | mRNA | upstream | 17861 | 22653613 ~ 22662482 (-) | True | LOC113540005 |
| XM_034303297.1 | mRNA | upstream | 43437 | 22679189 ~ 22701151 (-) | False | rgs20 |
| XM_026935863.2 | mRNA | upstream | 43437 | 22679189 ~ 22690918 (-) | False | rgs20 |
| XM_026935862.2 | mRNA | upstream | 43437 | 22679189 ~ 22690918 (-) | True | rgs20 |
| XM_026936105.2 | mRNA | upstream | 202275 | 22838027 ~ 22851158 (-) | True | emilin2a |
| TU81579 | other | downstream | 697016 | 21934526 ~ 21935169 (-) | True | G68760 |
| trnaa-ugc | other | downstream | 1213946 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
| XR_004578106.1 | other | downstream | 1261175 | 21368250 ~ 21371010 (-) | False | LOC113539989 |
| XR_004578104.1 | other | downstream | 1261175 | 21368250 ~ 21371010 (-) | True | LOC113539989 |
| XR_004578105.1 | other | downstream | 1261181 | 21368250 ~ 21371004 (-) | False | LOC113539989 |
| XR_004578082.1 | other | upstream | 658199 | 23293951 ~ 23306934 (-) | False | lrrcc1 |
| LOC117597073 | other | upstream | 844213 | 23479965 ~ 23483850 (-) | True | LOC117597073 |
| TU82584 | other | upstream | 844300 | 23480052 ~ 23480566 (-) | False | LOC117597073 |
| TU82579 | other | upstream | 857627 | 23493379 ~ 23493919 (-) | True | G69592 |
| LOC117597074 | other | upstream | 859283 | 23495035 ~ 23495897 (-) | True | LOC117597074 |
