Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU82063 |
| length | 350 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G69183 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 22649939 ~ 22652446 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82054 | lncRNA | downstream | 18377 | 22629615 ~ 22631562 (-) | True | LOC113540019 |
| TU82009 | lncRNA | downstream | 130673 | 22515704 ~ 22519266 (-) | True | G69136 |
| TU82012 | lncRNA | downstream | 137629 | 22505790 ~ 22512310 (-) | True | G69139 |
| TU82004 | lncRNA | downstream | 190451 | 22453222 ~ 22459488 (-) | True | G69131 |
| TU82001 | lncRNA | downstream | 197242 | 22409603 ~ 22452697 (-) | True | G69128 |
| TU82087 | lncRNA | upstream | 26832 | 22677376 ~ 22677918 (-) | True | G69203 |
| TU82121 | lncRNA | upstream | 120842 | 22771386 ~ 22772012 (-) | True | G69233 |
| TU82140 | lncRNA | upstream | 152842 | 22803386 ~ 22805908 (-) | True | G69248 |
| TU82146 | lncRNA | upstream | 158362 | 22808906 ~ 22809249 (-) | True | G69254 |
| TU82235 | lncRNA | upstream | 403970 | 23054514 ~ 23055383 (-) | True | G69320 |
| XM_034303443.1 | mRNA | downstream | 13851 | 22631245 ~ 22636088 (-) | False | LOC113540019 |
| XM_026936185.2 | mRNA | downstream | 13996 | 22631245 ~ 22635943 (-) | False | LOC113540019 |
| XM_026936186.2 | mRNA | downstream | 13996 | 22631245 ~ 22635943 (-) | False | LOC113540019 |
| XM_034303779.1 | mRNA | downstream | 49883 | 22545958 ~ 22600056 (-) | False | ctnnd2b |
| XM_034303845.1 | mRNA | upstream | 3069 | 22653613 ~ 22662482 (-) | True | LOC113540005 |
| XM_034303297.1 | mRNA | upstream | 28645 | 22679189 ~ 22701151 (-) | False | rgs20 |
| XM_026935863.2 | mRNA | upstream | 28645 | 22679189 ~ 22690918 (-) | False | rgs20 |
| XM_026935862.2 | mRNA | upstream | 28645 | 22679189 ~ 22690918 (-) | True | rgs20 |
| XM_026936105.2 | mRNA | upstream | 187483 | 22838027 ~ 22851158 (-) | True | emilin2a |
| TU82055 | other | downstream | 14187 | 22632185 ~ 22635752 (-) | False | LOC113540019 |
| TU81579 | other | downstream | 714770 | 21934526 ~ 21935169 (-) | True | G68760 |
| trnaa-ugc | other | downstream | 1231700 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
| XR_004578104.1 | other | downstream | 1278929 | 21368250 ~ 21371010 (-) | True | LOC113539989 |
| XR_004578082.1 | other | upstream | 643407 | 23293951 ~ 23306934 (-) | False | lrrcc1 |
| LOC117597073 | other | upstream | 829421 | 23479965 ~ 23483850 (-) | True | LOC117597073 |
| TU82584 | other | upstream | 829508 | 23480052 ~ 23480566 (-) | False | LOC117597073 |
| TU82579 | other | upstream | 842835 | 23493379 ~ 23493919 (-) | True | G69592 |
| LOC117597074 | other | upstream | 844491 | 23495035 ~ 23495897 (-) | True | LOC117597074 |
