Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU82087 |
| length | 543 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G69203 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 22677376 ~ 22677918 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82062 | lncRNA | downstream | 24930 | 22649939 ~ 22652446 (-) | True | G69183 |
| TU82063 | lncRNA | downstream | 26832 | 22649939 ~ 22650544 (-) | False | G69183 |
| TU82054 | lncRNA | downstream | 45814 | 22629615 ~ 22631562 (-) | True | LOC113540019 |
| TU82009 | lncRNA | downstream | 158110 | 22515704 ~ 22519266 (-) | True | G69136 |
| TU82012 | lncRNA | downstream | 165066 | 22505790 ~ 22512310 (-) | True | G69139 |
| TU82121 | lncRNA | upstream | 93468 | 22771386 ~ 22772012 (-) | True | G69233 |
| TU82140 | lncRNA | upstream | 125468 | 22803386 ~ 22805908 (-) | True | G69248 |
| TU82146 | lncRNA | upstream | 130988 | 22808906 ~ 22809249 (-) | True | G69254 |
| TU82235 | lncRNA | upstream | 376596 | 23054514 ~ 23055383 (-) | True | G69320 |
| XR_004578004.1 | lncRNA | upstream | 594244 | 23272162 ~ 23273614 (-) | True | LOC117597081 |
| XM_034303845.1 | mRNA | downstream | 14894 | 22653613 ~ 22662482 (-) | True | LOC113540005 |
| XM_034303443.1 | mRNA | downstream | 41288 | 22631245 ~ 22636088 (-) | False | LOC113540019 |
| XM_026936185.2 | mRNA | downstream | 41433 | 22631245 ~ 22635943 (-) | False | LOC113540019 |
| XM_026936186.2 | mRNA | downstream | 41433 | 22631245 ~ 22635943 (-) | False | LOC113540019 |
| XM_034303779.1 | mRNA | downstream | 77320 | 22545958 ~ 22600056 (-) | False | ctnnd2b |
| XM_034303297.1 | mRNA | upstream | 1271 | 22679189 ~ 22701151 (-) | False | rgs20 |
| XM_026935863.2 | mRNA | upstream | 1271 | 22679189 ~ 22690918 (-) | False | rgs20 |
| XM_026935862.2 | mRNA | upstream | 1271 | 22679189 ~ 22690918 (-) | True | rgs20 |
| XM_026936105.2 | mRNA | upstream | 160109 | 22838027 ~ 22851158 (-) | True | emilin2a |
| XM_026935864.2 | mRNA | upstream | 308743 | 22986661 ~ 22990616 (-) | True | adcyap1b |
| TU82055 | other | downstream | 41624 | 22632185 ~ 22635752 (-) | False | LOC113540019 |
| TU81579 | other | downstream | 742207 | 21934526 ~ 21935169 (-) | True | G68760 |
| trnaa-ugc | other | downstream | 1259137 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
| XR_004578104.1 | other | downstream | 1306366 | 21368250 ~ 21371010 (-) | True | LOC113539989 |
| XR_004578082.1 | other | upstream | 616033 | 23293951 ~ 23306934 (-) | False | lrrcc1 |
| LOC117597073 | other | upstream | 802047 | 23479965 ~ 23483850 (-) | True | LOC117597073 |
| TU82584 | other | upstream | 802134 | 23480052 ~ 23480566 (-) | False | LOC117597073 |
| TU82579 | other | upstream | 815461 | 23493379 ~ 23493919 (-) | True | G69592 |
| LOC117597074 | other | upstream | 817117 | 23495035 ~ 23495897 (-) | True | LOC117597074 |
