Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU82235 |
| length | 805 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G69320 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23054514 ~ 23055383 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82146 | lncRNA | downstream | 245265 | 22808906 ~ 22809249 (-) | True | G69254 |
| TU82140 | lncRNA | downstream | 248606 | 22803386 ~ 22805908 (-) | True | G69248 |
| TU82121 | lncRNA | downstream | 282502 | 22771386 ~ 22772012 (-) | True | G69233 |
| TU82087 | lncRNA | downstream | 376596 | 22677376 ~ 22677918 (-) | True | G69203 |
| TU82062 | lncRNA | downstream | 402068 | 22649939 ~ 22652446 (-) | True | G69183 |
| XR_004578004.1 | lncRNA | upstream | 216779 | 23272162 ~ 23273614 (-) | True | LOC117597081 |
| TU82439 | lncRNA | upstream | 223192 | 23278575 ~ 23278782 (-) | True | G69503 |
| TU82468 | lncRNA | upstream | 275633 | 23331016 ~ 23331535 (-) | False | retreg1 |
| TU82494 | lncRNA | upstream | 341281 | 23396664 ~ 23397963 (-) | True | G69551 |
| TU82581 | lncRNA | upstream | 397850 | 23453233 ~ 23454221 (-) | True | LOC113540115 |
| XM_026937238.2 | mRNA | downstream | 4401 | 23041108 ~ 23050113 (-) | True | clul1 |
| XM_026935864.2 | mRNA | downstream | 63898 | 22986661 ~ 22990616 (-) | True | adcyap1b |
| XM_026935865.2 | mRNA | downstream | 63902 | 22986661 ~ 22990612 (-) | False | adcyap1b |
| XM_026936105.2 | mRNA | downstream | 203356 | 22838027 ~ 22851158 (-) | True | emilin2a |
| XM_034303297.1 | mRNA | downstream | 353363 | 22679189 ~ 22701151 (-) | False | rgs20 |
| XM_026936974.2 | mRNA | upstream | 94743 | 23150126 ~ 23174379 (-) | True | mrc1b |
| XM_034304094.1 | mRNA | upstream | 94743 | 23150126 ~ 23173899 (-) | False | mrc1b |
| XM_026936334.2 | mRNA | upstream | 174667 | 23230050 ~ 23263297 (-) | False | si:ch211-106h4.9 |
| XM_026936335.2 | mRNA | upstream | 174667 | 23230050 ~ 23263297 (-) | False | si:ch211-106h4.9 |
| XM_026936336.2 | mRNA | upstream | 174667 | 23230050 ~ 23263297 (-) | False | si:ch211-106h4.9 |
| TU82055 | other | downstream | 418762 | 22632185 ~ 22635752 (-) | False | LOC113540019 |
| TU81579 | other | downstream | 1119345 | 21934526 ~ 21935169 (-) | True | G68760 |
| trnaa-ugc | other | downstream | 1636275 | 21418168 ~ 21418239 (-) | True | trnaa-ugc |
| XR_004578104.1 | other | downstream | 1683504 | 21368250 ~ 21371010 (-) | True | LOC113539989 |
| XR_004578082.1 | other | upstream | 238568 | 23293951 ~ 23306934 (-) | False | lrrcc1 |
| LOC117597073 | other | upstream | 424582 | 23479965 ~ 23483850 (-) | True | LOC117597073 |
| TU82584 | other | upstream | 424669 | 23480052 ~ 23480566 (-) | False | LOC117597073 |
| TU82579 | other | upstream | 437996 | 23493379 ~ 23493919 (-) | True | G69592 |
| LOC117597074 | other | upstream | 439652 | 23495035 ~ 23495897 (-) | True | LOC117597074 |
