Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU82643 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G69649 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23594331 ~ 23594544 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82581 | lncRNA | downstream | 140110 | 23453233 ~ 23454221 (-) | True | LOC113540115 |
| XR_003403997.2 | lncRNA | downstream | 140127 | 23453340 ~ 23454204 (-) | False | LOC113540115 |
| XR_004577997.1 | lncRNA | downstream | 140127 | 23453340 ~ 23454204 (-) | False | LOC113540115 |
| TU82494 | lncRNA | downstream | 196368 | 23396664 ~ 23397963 (-) | True | G69551 |
| TU82468 | lncRNA | downstream | 262796 | 23331016 ~ 23331535 (-) | False | retreg1 |
| TU82692 | lncRNA | upstream | 56507 | 23651051 ~ 23651866 (-) | True | G69691 |
| TU82956 | lncRNA | upstream | 327562 | 23922106 ~ 23922538 (-) | True | G69916 |
| XR_004578012.1 | lncRNA | upstream | 336789 | 23931333 ~ 23932235 (-) | True | LOC117597086 |
| TU83094 | lncRNA | upstream | 543749 | 24138293 ~ 24138492 (-) | True | G70025 |
| TU83095 | lncRNA | upstream | 551034 | 24145578 ~ 24145784 (-) | True | G70026 |
| XM_026936998.2 | mRNA | downstream | 10835 | 23547170 ~ 23583496 (-) | True | amph |
| XM_034304072.1 | mRNA | downstream | 10836 | 23547170 ~ 23583495 (-) | False | amph |
| XM_026936999.2 | mRNA | downstream | 10836 | 23547170 ~ 23583495 (-) | False | amph |
| XM_026936182.2 | mRNA | downstream | 49599 | 23537428 ~ 23544732 (-) | True | LOC113540016 |
| XM_034303623.1 | mRNA | downstream | 89150 | 23466417 ~ 23505181 (-) | False | LOC113540113 |
| XM_026936706.2 | mRNA | upstream | 163840 | 23758384 ~ 23782113 (-) | True | fam49ba |
| XM_026936883.2 | mRNA | upstream | 189554 | 23784098 ~ 23843304 (-) | False | asap1a |
| XM_034303743.1 | mRNA | upstream | 189554 | 23784098 ~ 23843304 (-) | True | asap1a |
| XM_026936885.2 | mRNA | upstream | 189554 | 23784098 ~ 23843302 (-) | False | asap1a |
| XM_026936886.2 | mRNA | upstream | 189554 | 23784098 ~ 23842701 (-) | False | asap1a |
| LOC117597117 | other | downstream | 62315 | 23531238 ~ 23532016 (-) | True | LOC117597117 |
| LOC113540013 | other | downstream | 76661 | 23516930 ~ 23517670 (-) | True | LOC113540013 |
| LOC113540114 | other | downstream | 77972 | 23515699 ~ 23516359 (-) | True | LOC113540114 |
| LOC117597116 | other | downstream | 79396 | 23514374 ~ 23514935 (-) | True | LOC117597116 |
| LOC113540012 | other | downstream | 80292 | 23513456 ~ 23514039 (-) | True | LOC113540012 |
| XR_003404116.1 | other | upstream | 442174 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| TU83344 | other | upstream | 709830 | 24304374 ~ 24304926 (-) | True | G70255 |
| TU84653 | other | upstream | 2779214 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU84853 | other | upstream | 2877536 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | upstream | 2942558 | 26537102 ~ 26551030 (-) | False | G71596 |
