Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU83444 |
| length | 311 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 1 |
| gene id | ccdc24 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 24565741 ~ 24586048 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU83122 | lncRNA | downstream | 386337 | 24179031 ~ 24179864 (-) | True | G70044 |
| TU83096 | lncRNA | downstream | 419960 | 24145890 ~ 24146241 (-) | True | G70027 |
| TU83095 | lncRNA | downstream | 420417 | 24145578 ~ 24145784 (-) | True | G70026 |
| TU83094 | lncRNA | downstream | 427709 | 24138293 ~ 24138492 (-) | True | G70025 |
| XR_004578012.1 | lncRNA | downstream | 633966 | 23931333 ~ 23932235 (-) | True | LOC117597086 |
| TU83664 | lncRNA | upstream | 306119 | 24872630 ~ 24872833 (-) | True | G70540 |
| TU84048 | lncRNA | upstream | 843203 | 25409714 ~ 25445048 (-) | True | G70906 |
| TU84116 | lncRNA | upstream | 986566 | 25553077 ~ 25554229 (-) | True | G70970 |
| TU84165 | lncRNA | upstream | 1004798 | 25571309 ~ 25571525 (-) | True | G71013 |
| TU84189 | lncRNA | upstream | 1043726 | 25610237 ~ 25610440 (-) | True | G71037 |
| XM_034303195.1 | mRNA | downstream | 404408 | 24148572 ~ 24161793 (-) | True | prpf4ba |
| XM_026936854.2 | mRNA | downstream | 404408 | 24150372 ~ 24161793 (-) | False | prpf4ba |
| XM_034303196.1 | mRNA | downstream | 404408 | 24150372 ~ 24161793 (-) | False | prpf4ba |
| XM_026936857.2 | mRNA | downstream | 421175 | 24139799 ~ 24145026 (-) | True | LOC113540393 |
| XM_026937208.2 | mRNA | downstream | 450778 | 24110472 ~ 24115423 (-) | True | bfsp2 |
| XM_026937068.2 | mRNA | upstream | 35359 | 24601870 ~ 24740260 (-) | True | b4galt2 |
| XM_026937077.2 | mRNA | upstream | 181590 | 24748101 ~ 24755113 (-) | True | atp6v0b |
| XM_026936660.2 | mRNA | upstream | 317235 | 24883746 ~ 24911790 (-) | True | ptch2 |
| XM_034304115.1 | mRNA | upstream | 353016 | 24919527 ~ 24963142 (-) | False | eif2b3 |
| XM_026937228.2 | mRNA | upstream | 353140 | 24919651 ~ 24963880 (-) | True | eif2b3 |
| TU83344 | other | downstream | 261275 | 24304374 ~ 24304926 (-) | True | G70255 |
| XR_003404116.1 | other | downstream | 529347 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| LOC117597117 | other | downstream | 1034185 | 23531238 ~ 23532016 (-) | True | LOC117597117 |
| LOC113540013 | other | downstream | 1048531 | 23516930 ~ 23517670 (-) | True | LOC113540013 |
| LOC113540114 | other | downstream | 1049842 | 23515699 ~ 23516359 (-) | True | LOC113540114 |
| TU84653 | other | upstream | 1807247 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU84853 | other | upstream | 1905569 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | upstream | 1970591 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU85159 | other | upstream | 2530091 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU85245 | other | upstream | 2637272 | 27203783 ~ 27204186 (-) | True | G71909 |
