Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU84048 |
| length | 428 |
| lncRNA type | sense_over |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G70906 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 25409714 ~ 25445048 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU83664 | lncRNA | downstream | 536881 | 24872630 ~ 24872833 (-) | True | G70540 |
| TU83444 | lncRNA | downstream | 843203 | 24566201 ~ 24566511 (-) | False | ccdc24 |
| TU83122 | lncRNA | downstream | 1229850 | 24179031 ~ 24179864 (-) | True | G70044 |
| TU83096 | lncRNA | downstream | 1263473 | 24145890 ~ 24146241 (-) | True | G70027 |
| TU83095 | lncRNA | downstream | 1263930 | 24145578 ~ 24145784 (-) | True | G70026 |
| TU84116 | lncRNA | upstream | 108029 | 25553077 ~ 25554229 (-) | True | G70970 |
| TU84165 | lncRNA | upstream | 126261 | 25571309 ~ 25571525 (-) | True | G71013 |
| TU84189 | lncRNA | upstream | 165189 | 25610237 ~ 25610440 (-) | True | G71037 |
| XR_004578064.1 | lncRNA | upstream | 286345 | 25731393 ~ 25782894 (-) | True | LOC117597162 |
| XR_004578114.1 | lncRNA | upstream | 439080 | 25884128 ~ 25885243 (-) | True | LOC117597207 |
| XM_026937242.2 | mRNA | downstream | 153865 | 25139815 ~ 25255849 (-) | True | brinp2 |
| XM_034303672.1 | mRNA | downstream | 387298 | 25013206 ~ 25022416 (-) | False | cenpl |
| XM_026937139.2 | mRNA | downstream | 388321 | 25013206 ~ 25021393 (-) | True | cenpl |
| XM_026937140.2 | mRNA | downstream | 388335 | 25013206 ~ 25021379 (-) | False | cenpl |
| XM_034303670.1 | mRNA | downstream | 388637 | 25013206 ~ 25021077 (-) | False | cenpl |
| XM_026937049.2 | mRNA | upstream | 116286 | 25561334 ~ 25631200 (-) | True | pappa2 |
| XM_026937050.2 | mRNA | upstream | 135369 | 25580417 ~ 25631200 (-) | False | pappa2 |
| XM_026937257.2 | mRNA | upstream | 459392 | 25904440 ~ 25932761 (-) | True | tnn |
| XM_034303577.1 | mRNA | upstream | 525586 | 25970634 ~ 25973005 (-) | True | LOC117597050 |
| XM_026935873.2 | mRNA | upstream | 874239 | 26319287 ~ 26329275 (-) | True | parp2 |
| TU83344 | other | downstream | 1104788 | 24304374 ~ 24304926 (-) | True | G70255 |
| XR_003404116.1 | other | downstream | 1372860 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| LOC117597117 | other | downstream | 1877698 | 23531238 ~ 23532016 (-) | True | LOC117597117 |
| LOC113540013 | other | downstream | 1892044 | 23516930 ~ 23517670 (-) | True | LOC113540013 |
| LOC113540114 | other | downstream | 1893355 | 23515699 ~ 23516359 (-) | True | LOC113540114 |
| TU84653 | other | upstream | 928710 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU84853 | other | upstream | 1027032 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | upstream | 1092054 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU85159 | other | upstream | 1651554 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU85245 | other | upstream | 1758735 | 27203783 ~ 27204186 (-) | True | G71909 |
