Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU84165 |
| length | 217 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G71013 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 25571309 ~ 25571525 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84116 | lncRNA | downstream | 17080 | 25553077 ~ 25554229 (-) | True | G70970 |
| TU84048 | lncRNA | downstream | 126261 | 25409714 ~ 25445048 (-) | True | G70906 |
| TU83664 | lncRNA | downstream | 698476 | 24872630 ~ 24872833 (-) | True | G70540 |
| TU83444 | lncRNA | downstream | 1004798 | 24566201 ~ 24566511 (-) | False | ccdc24 |
| TU83122 | lncRNA | downstream | 1391445 | 24179031 ~ 24179864 (-) | True | G70044 |
| TU84189 | lncRNA | upstream | 38712 | 25610237 ~ 25610440 (-) | True | G71037 |
| XR_004578064.1 | lncRNA | upstream | 159868 | 25731393 ~ 25782894 (-) | True | LOC117597162 |
| XR_004578114.1 | lncRNA | upstream | 312603 | 25884128 ~ 25885243 (-) | True | LOC117597207 |
| TU84465 | lncRNA | upstream | 313134 | 25884659 ~ 25885257 (-) | False | LOC117597207 |
| TU84466 | lncRNA | upstream | 313134 | 25884659 ~ 25885257 (-) | False | LOC117597207 |
| XM_034303717.1 | mRNA | downstream | 146133 | 25423546 ~ 25425176 (-) | False | LOC117597083 |
| XM_034303716.1 | mRNA | downstream | 146133 | 25423546 ~ 25425176 (-) | True | LOC117597083 |
| XM_026937242.2 | mRNA | downstream | 315460 | 25139815 ~ 25255849 (-) | True | brinp2 |
| XM_034303670.1 | mRNA | downstream | 550232 | 25013206 ~ 25021077 (-) | False | cenpl |
| XM_026937050.2 | mRNA | upstream | 8892 | 25580417 ~ 25631200 (-) | False | pappa2 |
| XM_026937257.2 | mRNA | upstream | 332915 | 25904440 ~ 25932761 (-) | True | tnn |
| XM_034303577.1 | mRNA | upstream | 399109 | 25970634 ~ 25973005 (-) | True | LOC117597050 |
| XM_026935873.2 | mRNA | upstream | 747762 | 26319287 ~ 26329275 (-) | True | parp2 |
| XM_034303634.1 | mRNA | upstream | 747762 | 26319287 ~ 26328755 (-) | False | parp2 |
| TU83344 | other | downstream | 1266383 | 24304374 ~ 24304926 (-) | True | G70255 |
| XR_003404116.1 | other | downstream | 1534455 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| LOC117597117 | other | downstream | 2039293 | 23531238 ~ 23532016 (-) | True | LOC117597117 |
| LOC113540013 | other | downstream | 2053639 | 23516930 ~ 23517670 (-) | True | LOC113540013 |
| LOC113540114 | other | downstream | 2054950 | 23515699 ~ 23516359 (-) | True | LOC113540114 |
| TU84653 | other | upstream | 802233 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU84853 | other | upstream | 900555 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | upstream | 965577 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU85159 | other | upstream | 1525077 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU85245 | other | upstream | 1632258 | 27203783 ~ 27204186 (-) | True | G71909 |
