Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU85024 |
| length | 1173 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G71734 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 26847346 ~ 26859455 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84994 | lncRNA | downstream | 150249 | 26696893 ~ 26697097 (-) | True | G71707 |
| TU84992 | lncRNA | downstream | 151025 | 26694946 ~ 26696321 (-) | True | G71705 |
| TU84990 | lncRNA | downstream | 156952 | 26689070 ~ 26690394 (-) | True | G71704 |
| TU84986 | lncRNA | downstream | 175501 | 26671641 ~ 26671845 (-) | True | G71700 |
| TU84985 | lncRNA | downstream | 175810 | 26671260 ~ 26671536 (-) | True | G71699 |
| TU85065 | lncRNA | upstream | 35226 | 26894681 ~ 26895564 (-) | True | G71764 |
| TU85066 | lncRNA | upstream | 75535 | 26934990 ~ 26935197 (-) | True | G71765 |
| TU85140 | lncRNA | upstream | 171862 | 27031317 ~ 27036462 (-) | True | G71815 |
| TU85141 | lncRNA | upstream | 171862 | 27031317 ~ 27035852 (-) | False | G71815 |
| TU85185 | lncRNA | upstream | 283651 | 27143106 ~ 27151314 (-) | False | G71854 |
| XM_034303326.1 | mRNA | downstream | 2328 | 26835646 ~ 26845018 (-) | False | samd7 |
| XM_034303325.1 | mRNA | downstream | 3373 | 26835646 ~ 26843973 (-) | False | samd7 |
| XM_034303324.1 | mRNA | downstream | 4064 | 26835646 ~ 26843282 (-) | False | samd7 |
| XM_026936549.2 | mRNA | downstream | 4177 | 26835646 ~ 26843169 (-) | True | samd7 |
| XM_034303851.1 | mRNA | downstream | 11458 | 26835025 ~ 26835888 (-) | True | LOC117597119 |
| XM_026937244.2 | mRNA | upstream | 22013 | 26881468 ~ 26889336 (-) | True | nadkb |
| XM_026937243.2 | mRNA | upstream | 22013 | 26881468 ~ 26889334 (-) | False | nadkb |
| XM_026936963.2 | mRNA | upstream | 44453 | 26903908 ~ 26913580 (-) | False | skila |
| XM_026936961.2 | mRNA | upstream | 44453 | 26903908 ~ 26913580 (-) | True | skila |
| XM_026936874.2 | mRNA | upstream | 57704 | 26917159 ~ 26933519 (-) | True | prkci |
| TU84853 | other | downstream | 296316 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | downstream | 296316 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU84653 | other | downstream | 471258 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU83344 | other | downstream | 2542420 | 24304374 ~ 24304926 (-) | True | G70255 |
| XR_003404116.1 | other | downstream | 2810492 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| TU85159 | other | upstream | 237147 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU85245 | other | upstream | 344328 | 27203783 ~ 27204186 (-) | True | G71909 |
| trnat-ugu_3 | other | upstream | 535902 | 27395357 ~ 27395429 (-) | True | trnat-ugu_3 |
| trnat-ugu_4 | other | upstream | 536696 | 27396151 ~ 27396223 (-) | True | trnat-ugu_4 |
| XR_003404034.2 | other | upstream | 568965 | 27428420 ~ 27432678 (-) | False | LOC113540508 |
