Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86109 |
| length | 252 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G72652 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 28067582 ~ 28068084 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86047 | lncRNA | downstream | 54778 | 28011684 ~ 28012804 (-) | True | G72604 |
| XR_004578040.1 | lncRNA | downstream | 81726 | 27977078 ~ 27985856 (-) | False | LOC117597146 |
| TU86051 | lncRNA | downstream | 87246 | 27974470 ~ 27980336 (-) | True | LOC117597146 |
| TU85956 | lncRNA | downstream | 96787 | 27879538 ~ 27970795 (-) | True | G72517 |
| TU86108 | lncRNA | upstream | 408 | 28068492 ~ 28069277 (-) | True | G72651 |
| TU86122 | lncRNA | upstream | 13460 | 28081544 ~ 28111472 (-) | False | G72658 |
| TU86124 | lncRNA | upstream | 13460 | 28081544 ~ 28111472 (-) | False | G72658 |
| TU86126 | lncRNA | upstream | 13460 | 28081544 ~ 28111472 (-) | False | G72658 |
| TU86123 | lncRNA | upstream | 36415 | 28104499 ~ 28111472 (-) | True | G72658 |
| XM_026935893.2 | mRNA | downstream | 3053 | 28056712 ~ 28064529 (-) | True | cpdp |
| XM_026937119.2 | mRNA | downstream | 25797 | 28016064 ~ 28041785 (-) | False | prkag2b |
| XM_026937117.2 | mRNA | downstream | 25797 | 28016064 ~ 28041785 (-) | False | prkag2b |
| XM_034304035.1 | mRNA | downstream | 38531 | 28016064 ~ 28029051 (-) | True | prkag2b |
| XM_026936536.2 | mRNA | downstream | 228485 | 27704281 ~ 27839097 (-) | False | dpp6b |
| XM_026936704.2 | mRNA | upstream | 7532 | 28075616 ~ 28093936 (-) | True | tsc22d2 |
| XM_026936705.2 | mRNA | upstream | 19327 | 28087411 ~ 28093937 (-) | False | tsc22d2 |
| XM_026936392.2 | mRNA | upstream | 49008 | 28117092 ~ 28122103 (-) | True | ahsg2 |
| XM_034303980.1 | mRNA | upstream | 55998 | 28124082 ~ 28140907 (-) | False | LOC113540134 |
| XM_026936390.2 | mRNA | upstream | 55998 | 28124082 ~ 28138768 (-) | True | LOC113540134 |
| XR_003404039.2 | other | downstream | 25797 | 28016064 ~ 28041785 (-) | False | prkag2b |
| trnat-ugu_9 | other | downstream | 442774 | 27624736 ~ 27624808 (-) | True | trnat-ugu_9 |
| trnat-ugu_7 | other | downstream | 446454 | 27621056 ~ 27621128 (-) | True | trnat-ugu_7 |
| XR_004578066.1 | other | downstream | 511596 | 27547752 ~ 27555986 (-) | False | pcyt1aa |
| XR_003404034.2 | other | downstream | 634904 | 27428420 ~ 27432678 (-) | False | LOC113540508 |
| trnas-uga_1 | other | upstream | 168102 | 28236186 ~ 28236267 (-) | True | trnas-uga_1 |
| trnas-uga_2 | other | upstream | 168640 | 28236724 ~ 28236805 (-) | True | trnas-uga_2 |
| XR_004578096.1 | other | upstream | 580240 | 28648324 ~ 28652425 (-) | False | LOC113540437 |
| XR_004577984.1 | other | upstream | 805494 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004577982.1 | other | upstream | 805496 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
