Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86223 |
| length | 395 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G72726 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 28397661 ~ 28471771 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86202 | lncRNA | downstream | 14201 | 28343134 ~ 28383460 (-) | True | G72709 |
| TU86215 | lncRNA | downstream | 18529 | 28365657 ~ 28379132 (-) | True | G72720 |
| TU86171 | lncRNA | downstream | 197852 | 28197991 ~ 28199809 (-) | False | LOC117597043 |
| TU86175 | lncRNA | downstream | 197852 | 28199219 ~ 28199809 (-) | False | LOC117597043 |
| TU86125 | lncRNA | downstream | 252795 | 28104546 ~ 28144866 (-) | False | G72658 |
| TU86306 | lncRNA | upstream | 195552 | 28667323 ~ 28668643 (-) | True | G72796 |
| XR_004577998.1 | lncRNA | upstream | 241263 | 28713034 ~ 28717955 (-) | True | LOC117597077 |
| TU86345 | lncRNA | upstream | 311152 | 28782923 ~ 28784140 (-) | True | G72824 |
| TU86322 | lncRNA | upstream | 315852 | 28787623 ~ 28791829 (-) | False | LOC117597168 |
| TU86430 | lncRNA | upstream | 360613 | 28832384 ~ 28833720 (-) | True | G72893 |
| XM_034304138.1 | mRNA | downstream | 111003 | 28276696 ~ 28286658 (-) | True | ro60 |
| XM_034303645.1 | mRNA | downstream | 122346 | 28238896 ~ 28275315 (-) | True | cdc73 |
| XM_034303546.1 | mRNA | downstream | 172058 | 28198023 ~ 28225603 (-) | True | LOC117597043 |
| XM_034303542.1 | mRNA | downstream | 201604 | 28173321 ~ 28196057 (-) | True | LOC113540124 |
| XM_026936156.2 | mRNA | upstream | 4660 | 28476431 ~ 28491847 (-) | True | shha |
| XM_034303284.1 | mRNA | upstream | 103137 | 28574908 ~ 28605243 (-) | True | lmbr1 |
| XM_034303285.1 | mRNA | upstream | 103137 | 28574908 ~ 28605242 (-) | False | lmbr1 |
| XM_026936574.2 | mRNA | upstream | 139420 | 28611191 ~ 28619112 (-) | True | LOC113540234 |
| XM_026936572.2 | mRNA | upstream | 148045 | 28619816 ~ 28628143 (-) | False | LOC113540232 |
| trnas-uga_2 | other | downstream | 160856 | 28236724 ~ 28236805 (-) | True | trnas-uga_2 |
| trnas-uga_1 | other | downstream | 161394 | 28236186 ~ 28236267 (-) | True | trnas-uga_1 |
| XR_003404039.2 | other | downstream | 355876 | 28016064 ~ 28041785 (-) | False | prkag2b |
| trnat-ugu_9 | other | downstream | 772853 | 27624736 ~ 27624808 (-) | True | trnat-ugu_9 |
| trnat-ugu_7 | other | downstream | 776533 | 27621056 ~ 27621128 (-) | True | trnat-ugu_7 |
| XR_004578096.1 | other | upstream | 176553 | 28648324 ~ 28652425 (-) | False | LOC113540437 |
| XR_004577984.1 | other | upstream | 401807 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004577982.1 | other | upstream | 401809 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | upstream | 410556 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| TU86878 | other | upstream | 676867 | 29148638 ~ 29152381 (-) | False | usp33 |
