Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026936083.2 |
| length | 543 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 3 |
| gene id | LOC113539944 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 12260736 ~ 12263489 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74852 | lncRNA | downstream | 137726 | 12067332 ~ 12123010 (-) | True | G63174 |
| TU74721 | lncRNA | downstream | 256417 | 12004007 ~ 12004319 (-) | True | G63062 |
| TU74717 | lncRNA | downstream | 287789 | 11972711 ~ 11972947 (-) | True | G63058 |
| TU74670 | lncRNA | downstream | 293840 | 11936771 ~ 11966896 (-) | False | htr2cl1 |
| TU74690 | lncRNA | downstream | 362635 | 11897845 ~ 11898101 (-) | True | G63031 |
| TU74905 | lncRNA | upstream | 8883 | 12272372 ~ 12277612 (-) | False | LOC113539775 |
| TU74923 | lncRNA | upstream | 61971 | 12325460 ~ 12325671 (-) | True | G63219 |
| TU74974 | lncRNA | upstream | 90903 | 12354392 ~ 12355772 (-) | True | G63267 |
| TU75090 | lncRNA | upstream | 221385 | 12484874 ~ 12489553 (-) | False | tmem256 |
| TU75226 | lncRNA | upstream | 403952 | 12667441 ~ 12670500 (-) | True | G63502 |
| XM_034303416.1 | mRNA | downstream | 4221 | 12253245 ~ 12256515 (-) | True | ugt5g1 |
| XM_034303417.1 | mRNA | downstream | 5634 | 12253245 ~ 12255102 (-) | False | ugt5g1 |
| XM_026935929.2 | mRNA | downstream | 10982 | 12246962 ~ 12249754 (-) | True | si:dkey-165a24.9 |
| XM_026935927.2 | mRNA | downstream | 17963 | 12227421 ~ 12242773 (-) | True | fxr2 |
| XM_026935932.2 | mRNA | downstream | 38797 | 12212987 ~ 12221939 (-) | True | ponzr6 |
| XM_026936202.2 | mRNA | upstream | 492 | 12263981 ~ 12265953 (-) | True | ponzr4 |
| XM_026937070.2 | mRNA | upstream | 3948 | 12267437 ~ 12269217 (-) | True | LOC113540514 |
| XM_026937071.2 | mRNA | upstream | 3948 | 12267437 ~ 12269156 (-) | False | LOC113540514 |
| XM_026935820.2 | mRNA | upstream | 9201 | 12272690 ~ 12277647 (-) | False | LOC113539775 |
| XM_026935818.2 | mRNA | upstream | 15200 | 12278689 ~ 12284886 (-) | True | LOC113539774 |
| TU74889 | other | downstream | 11680 | 12247274 ~ 12249056 (-) | False | si:dkey-165a24.9 |
| TU74378 | other | downstream | 725723 | 11533764 ~ 11535013 (-) | False | LOC117597110 |
| XR_003404120.1 | other | downstream | 1046314 | 11214322 ~ 11214422 (-) | True | LOC113540752 |
| XR_003404119.1 | other | downstream | 1047802 | 11212834 ~ 11212934 (-) | True | LOC113540751 |
| XR_003404121.1 | other | downstream | 1051903 | 11208733 ~ 11208833 (-) | True | LOC113540753 |
| TU74900 | other | upstream | 8729 | 12272218 ~ 12277612 (-) | True | LOC113539775 |
| TU74899 | other | upstream | 8883 | 12272372 ~ 12277612 (-) | False | LOC113539775 |
| TU74901 | other | upstream | 8883 | 12272372 ~ 12277669 (-) | False | LOC113539775 |
| XR_003404098.1 | other | upstream | 940784 | 13204273 ~ 13204462 (-) | True | LOC113540725 |
| XR_003404087.1 | other | upstream | 1640342 | 13903831 ~ 13904021 (-) | True | LOC113540713 |
