Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026936878.2 |
| length | 1320 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 12 |
| gene id | zte38 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 28699669 ~ 28706523 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K12778 | HORMAD, HOP1; meiosis-specific protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86306 | lncRNA | downstream | 31026 | 28667323 ~ 28668643 (-) | True | G72796 |
| TU86223 | lncRNA | downstream | 227898 | 28397661 ~ 28471771 (-) | True | G72726 |
| TU86202 | lncRNA | downstream | 316209 | 28343134 ~ 28383460 (-) | True | G72709 |
| TU86215 | lncRNA | downstream | 320537 | 28365657 ~ 28379132 (-) | True | G72720 |
| TU86175 | lncRNA | downstream | 499860 | 28199219 ~ 28199809 (-) | False | LOC117597043 |
| XR_004577998.1 | lncRNA | upstream | 6511 | 28713034 ~ 28717955 (-) | True | LOC117597077 |
| TU86345 | lncRNA | upstream | 76400 | 28782923 ~ 28784140 (-) | True | G72824 |
| TU86322 | lncRNA | upstream | 81100 | 28787623 ~ 28791829 (-) | False | LOC117597168 |
| TU86430 | lncRNA | upstream | 125861 | 28832384 ~ 28833720 (-) | True | G72893 |
| XR_004577988.1 | lncRNA | upstream | 185493 | 28892016 ~ 28896799 (-) | False | LOC117597038 |
| XM_026937185.2 | mRNA | downstream | 9657 | 28686556 ~ 28690012 (-) | True | uck2b |
| XM_026937186.2 | mRNA | downstream | 14093 | 28682472 ~ 28685576 (-) | True | czib |
| XM_034304106.1 | mRNA | downstream | 18965 | 28668979 ~ 28680704 (-) | True | scp2a |
| XM_026936934.2 | mRNA | downstream | 47244 | 28648324 ~ 28652425 (-) | True | LOC113540437 |
| XM_034304008.1 | mRNA | downstream | 57274 | 28632754 ~ 28642395 (-) | True | dcaf8 |
| XM_026936341.2 | mRNA | upstream | 1506 | 28708029 ~ 28711708 (-) | True | prdx1 |
| XM_034303626.1 | mRNA | upstream | 1506 | 28708029 ~ 28711089 (-) | False | prdx1 |
| XM_034303624.1 | mRNA | upstream | 16327 | 28722850 ~ 28736753 (-) | True | si:ch73-182a11.2 |
| XM_034303625.1 | mRNA | upstream | 19297 | 28725820 ~ 28736753 (-) | False | si:ch73-182a11.2 |
| XM_034303988.1 | mRNA | upstream | 39107 | 28745630 ~ 28756644 (-) | True | LOC113540626 |
| XR_004578096.1 | other | downstream | 47244 | 28648324 ~ 28652425 (-) | False | LOC113540437 |
| trnas-uga_2 | other | downstream | 462864 | 28236724 ~ 28236805 (-) | True | trnas-uga_2 |
| trnas-uga_1 | other | downstream | 463402 | 28236186 ~ 28236267 (-) | True | trnas-uga_1 |
| XR_003404039.2 | other | downstream | 657884 | 28016064 ~ 28041785 (-) | False | prkag2b |
| trnat-ugu_9 | other | downstream | 1074861 | 27624736 ~ 27624808 (-) | True | trnat-ugu_9 |
| XR_004577984.1 | other | upstream | 167055 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004577982.1 | other | upstream | 167057 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | upstream | 175804 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| TU86878 | other | upstream | 442115 | 29148638 ~ 29152381 (-) | False | usp33 |
| XR_003404076.1 | other | upstream | 816871 | 29523394 ~ 29523466 (-) | True | LOC113540702 |
