Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026937076.2 |
| length | 1249 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | cnpy4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 13527886 ~ 13533264 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| id | description |
|---|---|
| K22816 | CNPY3_4; protein canopy 3/4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU75699 | lncRNA | downstream | 60484 | 13450437 ~ 13467402 (-) | True | G63907 |
| TU75701 | lncRNA | downstream | 61168 | 13447955 ~ 13466718 (-) | True | G63908 |
| TU75716 | lncRNA | downstream | 85056 | 13442529 ~ 13442830 (-) | True | G63920 |
| TU75713 | lncRNA | downstream | 88257 | 13436056 ~ 13439629 (-) | True | zgc:194312 |
| TU75706 | lncRNA | downstream | 109356 | 13418312 ~ 13418530 (-) | True | G63913 |
| TU76014 | lncRNA | upstream | 20824 | 13554088 ~ 13554346 (-) | True | G64163 |
| TU76015 | lncRNA | upstream | 21600 | 13554864 ~ 13555077 (-) | True | G64164 |
| TU75988 | lncRNA | upstream | 31369 | 13564633 ~ 13569597 (-) | True | G64147 |
| XR_004578000.1 | lncRNA | upstream | 183061 | 13716325 ~ 13723916 (-) | True | LOC117597078 |
| TU76107 | lncRNA | upstream | 205325 | 13738589 ~ 13743598 (-) | True | G64222 |
| XM_026936111.2 | mRNA | downstream | 6360 | 13505741 ~ 13521526 (-) | True | ntn5 |
| XM_026936415.2 | mRNA | downstream | 87366 | 13437087 ~ 13440520 (-) | False | zgc:194312 |
| XM_026935899.2 | mRNA | downstream | 137921 | 13388333 ~ 13389965 (-) | True | si:ch73-335l21.4 |
| XM_034303430.1 | mRNA | downstream | 219408 | 13289976 ~ 13308478 (-) | False | acap1 |
| XM_034303429.1 | mRNA | downstream | 219411 | 13286262 ~ 13308475 (-) | True | acap1 |
| XM_026936261.2 | mRNA | upstream | 151472 | 13684736 ~ 13695000 (-) | True | usp12b |
| XM_026936327.2 | mRNA | upstream | 213975 | 13747239 ~ 13797445 (-) | False | col4a5 |
| XM_026936326.2 | mRNA | upstream | 213975 | 13747239 ~ 13797445 (-) | True | col4a5 |
| XM_034303949.1 | mRNA | upstream | 220534 | 13753798 ~ 13797445 (-) | False | col4a5 |
| XM_026936919.2 | mRNA | upstream | 379419 | 13912683 ~ 13967911 (-) | True | sema4f |
| XR_003404098.1 | other | downstream | 323424 | 13204273 ~ 13204462 (-) | True | LOC113540725 |
| TU74901 | other | downstream | 1250217 | 12272372 ~ 12277669 (-) | False | LOC113539775 |
| TU74900 | other | downstream | 1250274 | 12272218 ~ 12277612 (-) | True | LOC113539775 |
| TU74899 | other | downstream | 1250274 | 12272372 ~ 12277612 (-) | False | LOC113539775 |
| TU74889 | other | downstream | 1278830 | 12247274 ~ 12249056 (-) | False | si:dkey-165a24.9 |
| XR_003404087.1 | other | upstream | 370567 | 13903831 ~ 13904021 (-) | True | LOC113540713 |
| XR_003404068.1 | other | upstream | 374573 | 13907837 ~ 13908000 (-) | True | LOC113540694 |
| XR_004578131.1 | other | upstream | 375903 | 13909167 ~ 13909357 (-) | True | LOC113540747 |
| TU76338 | other | upstream | 699545 | 14232809 ~ 14243681 (-) | True | G64436 |
| trnae-cuc_13 | other | upstream | 1201392 | 14734656 ~ 14734727 (-) | True | trnae-cuc_13 |
