Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034304115.1 |
| length | 1486 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 11 |
| gene id | eif2b3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 24919527 ~ 24963880 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0051716 | cellular response to stimulus | biological_process |
| GO:0006413 | translational initiation | biological_process |
| GO:0043087 | regulation of GTPase activity | biological_process |
| GO:0014003 | oligodendrocyte development | biological_process |
| GO:0005851 | eukaryotic translation initiation factor 2B complex | cellular_component |
| GO:0005085 | guanyl-nucleotide exchange factor activity | molecular_function |
| GO:0016779 | nucleotidyltransferase activity | molecular_function |
| GO:0003743 | translation initiation factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU83664 | lncRNA | downstream | 46694 | 24872630 ~ 24872833 (-) | True | G70540 |
| TU83444 | lncRNA | downstream | 353016 | 24566201 ~ 24566511 (-) | False | ccdc24 |
| TU83122 | lncRNA | downstream | 739663 | 24179031 ~ 24179864 (-) | True | G70044 |
| TU83096 | lncRNA | downstream | 773286 | 24145890 ~ 24146241 (-) | True | G70027 |
| TU83095 | lncRNA | downstream | 773743 | 24145578 ~ 24145784 (-) | True | G70026 |
| TU84048 | lncRNA | upstream | 446572 | 25409714 ~ 25445048 (-) | True | G70906 |
| TU84116 | lncRNA | upstream | 589935 | 25553077 ~ 25554229 (-) | True | G70970 |
| TU84165 | lncRNA | upstream | 608167 | 25571309 ~ 25571525 (-) | True | G71013 |
| TU84189 | lncRNA | upstream | 647095 | 25610237 ~ 25610440 (-) | True | G71037 |
| XR_004578064.1 | lncRNA | upstream | 768251 | 25731393 ~ 25782894 (-) | True | LOC117597162 |
| XM_026936660.2 | mRNA | downstream | 7737 | 24883746 ~ 24911790 (-) | True | ptch2 |
| XM_026937077.2 | mRNA | downstream | 164414 | 24748101 ~ 24755113 (-) | True | atp6v0b |
| XM_026937068.2 | mRNA | downstream | 179267 | 24601870 ~ 24740260 (-) | True | b4galt2 |
| XM_026936541.2 | mRNA | downstream | 333479 | 24565741 ~ 24586048 (-) | True | ccdc24 |
| XM_026936542.2 | mRNA | downstream | 333580 | 24565741 ~ 24585947 (-) | False | ccdc24 |
| XM_034303672.1 | mRNA | upstream | 50064 | 25013206 ~ 25022416 (-) | False | cenpl |
| XM_026937139.2 | mRNA | upstream | 50064 | 25013206 ~ 25021393 (-) | True | cenpl |
| XM_026937140.2 | mRNA | upstream | 50064 | 25013206 ~ 25021379 (-) | False | cenpl |
| XM_034303670.1 | mRNA | upstream | 50064 | 25013206 ~ 25021077 (-) | False | cenpl |
| XM_034303671.1 | mRNA | upstream | 50064 | 25013206 ~ 25021064 (-) | False | cenpl |
| TU83344 | other | downstream | 614601 | 24304374 ~ 24304926 (-) | True | G70255 |
| XR_003404116.1 | other | downstream | 882673 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| LOC117597117 | other | downstream | 1387511 | 23531238 ~ 23532016 (-) | True | LOC117597117 |
| LOC113540013 | other | downstream | 1401857 | 23516930 ~ 23517670 (-) | True | LOC113540013 |
| LOC113540114 | other | downstream | 1403168 | 23515699 ~ 23516359 (-) | True | LOC113540114 |
| TU84653 | other | upstream | 1410616 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU84853 | other | upstream | 1508938 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | upstream | 1573960 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU85159 | other | upstream | 2133460 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU85245 | other | upstream | 2240641 | 27203783 ~ 27204186 (-) | True | G71909 |
