Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404068.1 |
| length | 164 |
| RNA type | ncRNA |
| GC content | 0.56 |
| exon number | 1 |
| gene id | LOC113540694 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 13907837 ~ 13908000 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU76160 | lncRNA | downstream | 17620 | 13888688 ~ 13890217 (-) | True | G64267 |
| TU76137 | lncRNA | downstream | 27109 | 13878030 ~ 13880728 (-) | True | G64252 |
| TU76151 | lncRNA | downstream | 35558 | 13869009 ~ 13872279 (-) | True | G64261 |
| TU76107 | lncRNA | downstream | 164239 | 13738589 ~ 13743598 (-) | True | G64222 |
| XR_004578000.1 | lncRNA | downstream | 183921 | 13716325 ~ 13723916 (-) | True | LOC117597078 |
| TU76189 | lncRNA | upstream | 84571 | 13992571 ~ 13996399 (-) | True | G64294 |
| TU76191 | lncRNA | upstream | 90735 | 13998735 ~ 13999683 (-) | True | G64296 |
| TU76201 | lncRNA | upstream | 108595 | 14016595 ~ 14016950 (-) | True | G64305 |
| TU76186 | lncRNA | upstream | 132666 | 14040666 ~ 14041288 (-) | True | G64291 |
| TU76336 | lncRNA | upstream | 270574 | 14178574 ~ 14230828 (-) | True | G64434 |
| XM_026936327.2 | mRNA | downstream | 110392 | 13747239 ~ 13797445 (-) | False | col4a5 |
| XM_026936326.2 | mRNA | downstream | 110392 | 13747239 ~ 13797445 (-) | True | col4a5 |
| XM_034303949.1 | mRNA | downstream | 110392 | 13753798 ~ 13797445 (-) | False | col4a5 |
| XM_026936261.2 | mRNA | downstream | 212837 | 13684736 ~ 13695000 (-) | True | usp12b |
| XM_026937076.2 | mRNA | downstream | 374573 | 13527886 ~ 13533264 (-) | True | cnpy4 |
| XM_026936919.2 | mRNA | upstream | 4683 | 13912683 ~ 13967911 (-) | True | sema4f |
| XM_026936736.2 | mRNA | upstream | 110458 | 14018458 ~ 14033040 (-) | True | dok1b |
| XM_026936012.2 | mRNA | upstream | 133951 | 14041951 ~ 14054035 (-) | True | LOC113539907 |
| XM_026936443.2 | mRNA | upstream | 171705 | 14079705 ~ 14086981 (-) | True | cct7 |
| XM_034303617.1 | mRNA | upstream | 249436 | 14157436 ~ 14220288 (-) | False | plcb3 |
| XR_003404087.1 | other | downstream | 3816 | 13903831 ~ 13904021 (-) | True | LOC113540713 |
| XR_003404098.1 | other | downstream | 703375 | 13204273 ~ 13204462 (-) | True | LOC113540725 |
| TU74901 | other | downstream | 1630168 | 12272372 ~ 12277669 (-) | False | LOC113539775 |
| TU74900 | other | downstream | 1630225 | 12272218 ~ 12277612 (-) | True | LOC113539775 |
| TU74899 | other | downstream | 1630225 | 12272372 ~ 12277612 (-) | False | LOC113539775 |
| XR_004578131.1 | other | upstream | 1167 | 13909167 ~ 13909357 (-) | True | LOC113540747 |
| TU76338 | other | upstream | 324809 | 14232809 ~ 14243681 (-) | True | G64436 |
| trnae-cuc_13 | other | upstream | 826656 | 14734656 ~ 14734727 (-) | True | trnae-cuc_13 |
| trnap-ugg_2 | other | upstream | 1967827 | 15875827 ~ 15875898 (-) | True | trnap-ugg_2 |
| XR_004578098.1 | other | upstream | 1971471 | 15879471 ~ 15904355 (-) | False | tbc1d19 |
