Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404076.1 |
| length | 73 |
| RNA type | ncRNA |
| GC content | 0.38 |
| exon number | 1 |
| gene id | LOC113540702 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 29523394 ~ 29523466 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86901 | lncRNA | downstream | 203060 | 29273589 ~ 29320334 (-) | True | G73327 |
| TU86893 | lncRNA | downstream | 305236 | 29216270 ~ 29218158 (-) | True | G73319 |
| TU86892 | lncRNA | downstream | 308343 | 29213553 ~ 29215051 (-) | True | G73318 |
| TU86818 | lncRNA | downstream | 327227 | 29128055 ~ 29196167 (-) | True | G73247 |
| TU86820 | lncRNA | downstream | 334054 | 29188158 ~ 29189340 (-) | True | G73249 |
| TU87006 | lncRNA | upstream | 16629 | 29540095 ~ 29540356 (-) | True | G73423 |
| TU87022 | lncRNA | upstream | 84135 | 29607601 ~ 29607805 (-) | True | G73439 |
| TU87036 | lncRNA | upstream | 147721 | 29671187 ~ 29674270 (-) | True | G73452 |
| TU87041 | lncRNA | upstream | 187620 | 29711086 ~ 29712194 (-) | True | G73457 |
| TU87042 | lncRNA | upstream | 189427 | 29712893 ~ 29713446 (-) | True | G73458 |
| XM_034303512.1 | mRNA | downstream | 57374 | 29461041 ~ 29466020 (-) | True | kcnmb2 |
| XM_026937229.2 | mRNA | downstream | 58596 | 29461041 ~ 29464798 (-) | False | kcnmb2 |
| XM_034303513.1 | mRNA | downstream | 58683 | 29461041 ~ 29464711 (-) | False | kcnmb2 |
| XM_026937224.2 | mRNA | downstream | 70601 | 29442115 ~ 29452793 (-) | True | mfsd8l2 |
| XM_034303445.1 | mRNA | downstream | 151868 | 29359500 ~ 29371526 (-) | True | pcolce2a |
| XM_026937263.2 | mRNA | upstream | 40755 | 29564221 ~ 29575414 (-) | True | LOC113540665 |
| XM_026937014.2 | mRNA | upstream | 53232 | 29576698 ~ 29592827 (-) | True | ripk2 |
| XM_026935978.2 | mRNA | upstream | 106504 | 29629970 ~ 29666855 (-) | False | LOC113539879 |
| XM_034303335.1 | mRNA | upstream | 106504 | 29629970 ~ 29666855 (-) | True | LOC113539879 |
| XM_026936973.2 | mRNA | upstream | 157778 | 29681244 ~ 29692555 (-) | True | si:ch211-13f8.2 |
| TU86878 | other | downstream | 371013 | 29148638 ~ 29152381 (-) | False | usp33 |
| XR_004577982.1 | other | downstream | 638429 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | downstream | 638429 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577984.1 | other | downstream | 641230 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004578096.1 | other | downstream | 870969 | 28648324 ~ 28652425 (-) | False | LOC113540437 |
| XR_003404072.2 | other | upstream | 257 | 29523723 ~ 29523912 (-) | True | LOC113540698 |
| XR_003404071.2 | other | upstream | 1043 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| XR_003404077.1 | other | upstream | 1523 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404065.2 | other | upstream | 41136 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
| XR_003403975.2 | other | upstream | 201122 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
