Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU50045 |
| length | 199 |
| lncRNA type | sense_over |
| GC content | 0.35 |
| exon number | 1 |
| gene id | maml3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 7438904 ~ 7589663 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50043 | lncRNA | downstream | 149 | 7436442 ~ 7438889 (-) | True | G42315 |
| TU49892 | lncRNA | downstream | 96357 | 7342467 ~ 7342681 (-) | True | G42179 |
| TU49878 | lncRNA | downstream | 123442 | 7313668 ~ 7315596 (-) | True | G42173 |
| XR_004577839.1 | lncRNA | downstream | 296736 | 7141099 ~ 7142302 (-) | True | LOC117596848 |
| TU49679 | lncRNA | downstream | 421633 | 7016765 ~ 7017405 (-) | True | G42008 |
| TU50091 | lncRNA | upstream | 129135 | 7568371 ~ 7652220 (-) | True | G42361 |
| TU50124 | lncRNA | upstream | 232351 | 7671587 ~ 7672864 (-) | True | G42391 |
| TU50125 | lncRNA | upstream | 236252 | 7675488 ~ 7675772 (-) | True | G42392 |
| TU50127 | lncRNA | upstream | 237861 | 7677097 ~ 7678737 (-) | False | G42394 |
| TU50130 | lncRNA | upstream | 237861 | 7677097 ~ 7678945 (-) | True | G42394 |
| XM_026941281.2 | mRNA | downstream | 54875 | 7361915 ~ 7384163 (-) | False | si:ch211-113e8.3 |
| XM_026941297.2 | mRNA | downstream | 54875 | 7361915 ~ 7384163 (-) | False | si:ch211-113e8.3 |
| XM_026941290.2 | mRNA | downstream | 54875 | 7361915 ~ 7384163 (-) | True | si:ch211-113e8.3 |
| XM_034302880.1 | mRNA | downstream | 100607 | 7332429 ~ 7338431 (-) | False | LOC113542008 |
| XM_034302881.1 | mRNA | downstream | 108962 | 7326874 ~ 7330076 (-) | False | LOC113542008 |
| XM_026941317.2 | mRNA | upstream | 190933 | 7630169 ~ 7646075 (-) | False | clgn |
| XM_026941308.2 | mRNA | upstream | 190933 | 7630169 ~ 7646029 (-) | False | clgn |
| XM_034302632.1 | mRNA | upstream | 190933 | 7630169 ~ 7644903 (-) | True | clgn |
| XM_026941398.2 | mRNA | upstream | 263416 | 7702652 ~ 7715901 (-) | True | zgc:153642 |
| XM_026943612.2 | mRNA | upstream | 383894 | 7823130 ~ 7825476 (-) | True | hmx4 |
| XR_004577908.1 | other | downstream | 234887 | 7161474 ~ 7204151 (-) | False | lef1 |
| XR_004577909.1 | other | downstream | 234887 | 7161474 ~ 7204151 (-) | False | lef1 |
| XR_004577821.1 | other | downstream | 1619525 | 5756711 ~ 5819513 (-) | False | gab1 |
| TU48529 | other | downstream | 2211115 | 5203706 ~ 5227923 (-) | False | lsm6 |
| trnam-cau_1 | other | upstream | 1027748 | 8466984 ~ 8467055 (-) | True | trnam-cau_1 |
| trnam-cau_2 | other | upstream | 1028800 | 8468036 ~ 8468107 (-) | True | trnam-cau_2 |
| trnam-cau_3 | other | upstream | 1029835 | 8469071 ~ 8469142 (-) | True | trnam-cau_3 |
| trnam-cau_4 | other | upstream | 1030750 | 8469986 ~ 8470057 (-) | True | trnam-cau_4 |
| trnae-cuc_7 | other | upstream | 1031122 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
