Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU98131 |
| length | 802 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G82759 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 14727857 ~ 14792165 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98125 | lncRNA | downstream | 122842 | 14601745 ~ 14605015 (-) | True | G82756 |
| XR_004578237.1 | lncRNA | downstream | 373917 | 14341038 ~ 14353940 (-) | True | LOC117597393 |
| TU97953 | lncRNA | downstream | 432047 | 14293937 ~ 14295810 (-) | True | G82604 |
| XR_004578251.1 | lncRNA | downstream | 776024 | 13945298 ~ 13951833 (-) | False | LOC113526223 |
| XR_004578250.1 | lncRNA | downstream | 776025 | 13943807 ~ 13951832 (-) | True | LOC113526223 |
| TU98251 | lncRNA | upstream | 127584 | 14919749 ~ 14920280 (-) | True | G82849 |
| TU98260 | lncRNA | upstream | 179513 | 14971678 ~ 14971897 (-) | True | G82858 |
| TU98263 | lncRNA | upstream | 199051 | 14991216 ~ 14991486 (-) | True | G82861 |
| TU98266 | lncRNA | upstream | 210369 | 15002534 ~ 15004759 (-) | True | G82864 |
| TU98371 | lncRNA | upstream | 293198 | 15085363 ~ 15105616 (-) | False | G82904 |
| XM_026912843.2 | mRNA | downstream | 83304 | 14619022 ~ 14644553 (-) | False | caska |
| XM_026913021.2 | mRNA | downstream | 133363 | 14591717 ~ 14594494 (-) | True | rpl8 |
| XM_026912678.2 | mRNA | downstream | 174362 | 14538868 ~ 14553495 (-) | True | med14 |
| XM_026912679.2 | mRNA | downstream | 174363 | 14538868 ~ 14553494 (-) | False | med14 |
| XM_026912498.2 | mRNA | downstream | 190666 | 14534411 ~ 14537191 (-) | True | si:ch211-218d20.15 |
| XM_026912145.2 | mRNA | upstream | 1741 | 14793906 ~ 14824547 (-) | True | mao |
| XM_026909636.2 | mRNA | upstream | 35510 | 14827675 ~ 14837409 (-) | True | ndp |
| XM_026948095.2 | mRNA | upstream | 50335 | 14842500 ~ 14851402 (-) | False | efhc2 |
| XM_026948104.2 | mRNA | upstream | 50576 | 14842741 ~ 14851402 (-) | True | efhc2 |
| XM_026947519.2 | mRNA | upstream | 61579 | 14853744 ~ 14857520 (-) | True | fundc1 |
| TU98093 | other | downstream | 174398 | 14552451 ~ 14553459 (-) | False | med14 |
| TU96948 | other | downstream | 1999832 | 12713199 ~ 12728025 (-) | False | hspbap1 |
| TU96950 | other | downstream | 2011188 | 12713199 ~ 12716669 (-) | False | hspbap1 |
| TU95687 | other | downstream | 3692296 | 11018279 ~ 11035561 (-) | True | G80656 |
| TU95628 | other | downstream | 3756700 | 10969417 ~ 10971157 (-) | True | G80600 |
| TU98227 | other | upstream | 35621 | 14827786 ~ 14837393 (-) | False | ndp |
| TU98290 | other | upstream | 271260 | 15063425 ~ 15077195 (-) | False | dcaf6 |
| TU99188 | other | upstream | 1427799 | 16219964 ~ 16220866 (-) | True | G83554 |
| TU99754 | other | upstream | 2236142 | 17028307 ~ 17039843 (-) | False | mettl8 |
| TU101475 | other | upstream | 4688955 | 19481120 ~ 19487739 (-) | True | grb14 |
