Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU109536 |
| length | 655 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G92247 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 714820 ~ 715497 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109526 | lncRNA | downstream | 6472 | 706750 ~ 708348 (-) | False | G92240 |
| TU109484 | lncRNA | downstream | 108744 | 604050 ~ 606076 (-) | True | G92220 |
| XR_004578333.1 | lncRNA | downstream | 224024 | 489562 ~ 490796 (-) | True | LOC117597554 |
| TU109450 | lncRNA | downstream | 319556 | 393032 ~ 395264 (-) | True | G92197 |
| TU108981 | lncRNA | downstream | 415723 | 298547 ~ 299097 (-) | True | G91873 |
| TU109520 | lncRNA | upstream | 15618 | 731115 ~ 732765 (-) | True | G92236 |
| TU109525 | lncRNA | upstream | 30030 | 745527 ~ 773557 (-) | True | G92239 |
| TU109513 | lncRNA | upstream | 67440 | 782937 ~ 786271 (-) | False | usp8 |
| TU109514 | lncRNA | upstream | 67440 | 782937 ~ 786271 (-) | False | usp8 |
| TU109515 | lncRNA | upstream | 67440 | 782937 ~ 786271 (-) | False | usp8 |
| XM_034305206.1 | mRNA | downstream | 15043 | 695169 ~ 699777 (-) | True | mibp2 |
| XM_034305207.1 | mRNA | downstream | 16263 | 695169 ~ 698557 (-) | False | mibp2 |
| XM_034305285.1 | mRNA | downstream | 54276 | 523454 ~ 660544 (-) | False | LOC113534387 |
| XM_034305179.1 | mRNA | upstream | 67413 | 782910 ~ 802212 (-) | True | usp8 |
| XM_026913982.2 | mRNA | upstream | 119619 | 835116 ~ 846927 (-) | True | slc27a2a |
| XM_034305119.1 | mRNA | upstream | 319452 | 1034949 ~ 1056267 (-) | True | LOC117597537 |
| XM_034305118.1 | mRNA | upstream | 319452 | 1034949 ~ 1041417 (-) | False | LOC117597537 |
| XM_034305122.1 | mRNA | upstream | 341208 | 1056705 ~ 1074903 (-) | True | homer2 |
| TU109527 | other | downstream | 4166 | 706750 ~ 710654 (-) | True | G92240 |
| TU108961 | other | downstream | 391210 | 302636 ~ 323610 (-) | False | dmxl2 |
| TU108836 | other | downstream | 569859 | 143425 ~ 144961 (-) | True | LOC113534658 |
| XR_003402800.2 | other | upstream | 120997 | 836494 ~ 846935 (-) | False | slc27a2a |
| TU109708 | other | upstream | 266570 | 982067 ~ 989056 (-) | True | G92340 |
| TU109707 | other | upstream | 267970 | 983467 ~ 989056 (-) | False | G92340 |
| TU109770 | other | upstream | 507224 | 1222721 ~ 1226302 (-) | True | c6h15orf48 |
| TU109955 | other | upstream | 800241 | 1515738 ~ 1531062 (-) | False | LOC113525562 |
