Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU109711 |
| length | 387 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G92343 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 982501 ~ 984521 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109605 | lncRNA | downstream | 5952 | 970248 ~ 976549 (-) | False | G92282 |
| TU109618 | lncRNA | downstream | 5952 | 970248 ~ 976549 (-) | False | G92282 |
| TU109617 | lncRNA | downstream | 7063 | 970248 ~ 975438 (-) | False | G92282 |
| TU109602 | lncRNA | downstream | 10592 | 931958 ~ 971909 (-) | True | G92282 |
| TU109608 | lncRNA | downstream | 10592 | 934794 ~ 971909 (-) | False | G92282 |
| TU109728 | lncRNA | upstream | 29926 | 1014447 ~ 1016182 (-) | True | G92359 |
| TU109649 | lncRNA | upstream | 165018 | 1149539 ~ 1216437 (-) | True | G92294 |
| TU109581 | lncRNA | upstream | 212638 | 1197159 ~ 1292493 (-) | False | bloc1s6 |
| TU109792 | lncRNA | upstream | 304180 | 1288701 ~ 1295898 (-) | True | G92412 |
| TU109844 | lncRNA | upstream | 352370 | 1336891 ~ 1341381 (-) | False | G92421 |
| XM_026913982.2 | mRNA | downstream | 135574 | 835116 ~ 846927 (-) | True | slc27a2a |
| XM_034305179.1 | mRNA | downstream | 180289 | 782910 ~ 802212 (-) | True | usp8 |
| XM_034305206.1 | mRNA | downstream | 282724 | 695169 ~ 699777 (-) | True | mibp2 |
| XM_034305207.1 | mRNA | downstream | 283944 | 695169 ~ 698557 (-) | False | mibp2 |
| XM_034305279.1 | mRNA | downstream | 322370 | 523454 ~ 660131 (-) | False | LOC113534387 |
| XM_034305119.1 | mRNA | upstream | 50428 | 1034949 ~ 1056267 (-) | True | LOC117597537 |
| XM_034305118.1 | mRNA | upstream | 50428 | 1034949 ~ 1041417 (-) | False | LOC117597537 |
| XM_034305122.1 | mRNA | upstream | 72184 | 1056705 ~ 1074903 (-) | True | homer2 |
| XM_034305121.1 | mRNA | upstream | 72184 | 1056705 ~ 1074009 (-) | False | homer2 |
| XM_034305120.1 | mRNA | upstream | 72184 | 1056705 ~ 1074007 (-) | False | homer2 |
| XR_003402800.2 | other | downstream | 135566 | 836494 ~ 846935 (-) | False | slc27a2a |
| TU109528 | other | downstream | 234971 | 707760 ~ 747530 (-) | False | G92240 |
| TU109527 | other | downstream | 271847 | 706750 ~ 710654 (-) | True | G92240 |
| TU108961 | other | downstream | 658891 | 302636 ~ 323610 (-) | False | dmxl2 |
| TU108836 | other | downstream | 837540 | 143425 ~ 144961 (-) | True | LOC113534658 |
| TU109770 | other | upstream | 238200 | 1222721 ~ 1226302 (-) | True | c6h15orf48 |
| TU109955 | other | upstream | 531217 | 1515738 ~ 1531062 (-) | False | LOC113525562 |
| TU109967 | other | upstream | 643280 | 1627801 ~ 1644217 (-) | False | sema6dl |
| TU109968 | other | upstream | 644108 | 1628629 ~ 1648286 (-) | False | sema6dl |
| TU109993 | other | upstream | 783884 | 1768405 ~ 1768795 (-) | True | G92531 |
